| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0898 |
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| Symbol | |
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| ID | 4172944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1070031 |
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| End bp | 1071092 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053899 |
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| Product | 2-keto-3-deoxy-galactonokinase |
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| Protein accession | YP_660478 |
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| Protein GI | 109897223 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.80443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACT TTAATCGAGC AGTCTTGATT TGCGTTGATT GGGGCAGCTC TAACTTACGC
GCTTATCTTA TTGATGGCAT GGGTGAGGTA TTAGCACGCC TGCAAAGCGA TAAAGGAGTG
TTGAATTTTA GCGCGGGGCA ATATGGCCCT GAGTTGAGCG GGTTATTACA GCCGTGGCTG
AGAGAGAAAG CAGTACCCGT TATGTTGGCG GGCATGGTAG GCAGCGCCCA AGGTTGGCAG
GATGCAGGTT ATGTTGCTTG CCCAGCCACA CTGGCTGACT TAGCCAAAAA TTTATGCTCG
GTAGCAAATT CAGTAGCCCA TGATAGACAG CGACAACCCT ATATTGTGCC TGGCGTAAAA
GGACTGTCCA ATTTCGGCCA AGTCGACGTG ATGCGCGGGG AAGAGGTGCA AATTTTTGGG
GCGCTATGCG CAACTTATCC AAATGCCGTC CAAGCAACCC CACTTGTGTG TTTGCCGGGC
ACTCATTCTA AATGGGCGCA GGTTACGATG GCACCTATCG AGGCTAGCGG CCTTAGCAGT
AATAGCATTG CGCTCTCTCA CATTACCCAG TTCAGTACTT ATATGACAGG GGAATTGTTT
GCGCTACTCA ACACCCATAG TATTTTAGGC AAAATGTGTC AGCACGTTGC TAATCCTGAA
AATACCAATA GCGGCGAGAT GTTTGATGGT GAAGCCTTTG ATGAAGGGGT AAAAACCGCC
CGCGCACCAG GTTCGTTACT ACACAAATTA TTCAGCGCGC GCAGCAAAGT ACTGAATAAC
GATTTGCTCG CCTCGGGTGT GCACAGTTAT TTGTCAGGAA TGCTGATTGG CACCGAAGTG
TTTGACATGC TCAGTGTGTA TCAACCCAAT GATATCAATA CTGCCGAAAA TACTAATTCA
GGGGGGCCTC ATACTCAGAT TATCCTTGTG GGAGCGCCCG CACTGAGCAA ACTTTATAAG
CGAGTAATTG CCAGCACATC CCTCAATGTA CGCTGCGTTG ATGCTGAAAC TGCATCTTGC
TTGGGCATGC TCAATATTGC CAAAGTCGCC GGTAAATTGT AG
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| Protein sequence | MIDFNRAVLI CVDWGSSNLR AYLIDGMGEV LARLQSDKGV LNFSAGQYGP ELSGLLQPWL
REKAVPVMLA GMVGSAQGWQ DAGYVACPAT LADLAKNLCS VANSVAHDRQ RQPYIVPGVK
GLSNFGQVDV MRGEEVQIFG ALCATYPNAV QATPLVCLPG THSKWAQVTM APIEASGLSS
NSIALSHITQ FSTYMTGELF ALLNTHSILG KMCQHVANPE NTNSGEMFDG EAFDEGVKTA
RAPGSLLHKL FSARSKVLNN DLLASGVHSY LSGMLIGTEV FDMLSVYQPN DINTAENTNS
GGPHTQIILV GAPALSKLYK RVIASTSLNV RCVDAETASC LGMLNIAKVA GKL
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