Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0867 |
Symbol | |
ID | 4171996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1023142 |
End bp | 1024215 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053870 |
Product | Rieske (2Fe-2S) region |
Protein accession | YP_660449 |
Protein GI | 109897194 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATCCAT TTAAATATAA AAGTTCAATC GTGCGCAACC GTTGGTATAT GGCGGCATTT TCAACCGAAA TAACCCGTGA GCCAATGGAA CGCACCATGC TAAACAAGCC TGTGGTTATG TATCGTAAAG AAGATGGTAC GCCCGTTGCC ATGTATGGCT TATGCCCCCA CCGTTATCTA CCTCTGGTGC AAGGTCGCGT TGAAGGCGAT GCTATTGTGT GTGGTTACCA CGGGTTCAAA TTTGCTGATA CTGGCGAGTG CATTCAAATT CCTTCGCAGC CAAAAGTCAC AGGTAGAATC TGCCAGCCAG TGTATAAAAT TATAGAAAAA GGCCCAATTT GTTGGATTTG GATGGGCGAT GAAGACAAAT GTGATATCGA TTTAATTCCG CCCTACGAAG ATTTTGGTTT GGATCAGCCA GGCTGGGATT TCCACTCGGC TAATTATTTT CATCTTGAAG GCCGCTCTCA GTTATTGGTC GATAACTTAA TGGACCTTAC CCACCTTCCT TATGTGCATC ACCATATCGC AGGGAAAGAT TCGATGGCAG ATATACCCAT TGTCACTGAA GAGCGTGAAA GAAGTTATCG CATAACACGC AATGGCAAGG CCCCCTGGAA TGATTATTTC AAGATGGTCT TTGGCCCAGA AGCTGAATTC GAGGGTGTAT GTGATTTTAT GATCAAGAGC GATTTTTTCG GTCCTGAATT CATGTCCACA AGTCTACCCA TTATCACGGC AGTGCCTGGC AAAAGTGAGG TTCCCAAAGA GTTGGGTTCG TTGATGATAC TTCATGGTGC TACCCCTGAA ACCGACACGA CAACTCACTA TTTTGGGTTT TCTACGCGTA ATTTCAGGTT AGGTGATGAA AGCTTAAACC AATTCCAACT TGCCGCCGAT CAGAAAATCC GTGCCCAAGA CCAGGTAGCG ATCAACGCTG TAGAAAAGAG GCTCGATTTT GCGGTCACTC AACAACGAGA ACTGTTAGTT GGAGCAGACA AGCCTGCGGT TCAGGTTAGA AGAAGGATTG AAGCCATGCT GGCGGAAGAA AATGTGCCTT TAGCTGACGC ATAA
|
Protein sequence | MYPFKYKSSI VRNRWYMAAF STEITREPME RTMLNKPVVM YRKEDGTPVA MYGLCPHRYL PLVQGRVEGD AIVCGYHGFK FADTGECIQI PSQPKVTGRI CQPVYKIIEK GPICWIWMGD EDKCDIDLIP PYEDFGLDQP GWDFHSANYF HLEGRSQLLV DNLMDLTHLP YVHHHIAGKD SMADIPIVTE ERERSYRITR NGKAPWNDYF KMVFGPEAEF EGVCDFMIKS DFFGPEFMST SLPIITAVPG KSEVPKELGS LMILHGATPE TDTTTHYFGF STRNFRLGDE SLNQFQLAAD QKIRAQDQVA INAVEKRLDF AVTQQRELLV GADKPAVQVR RRIEAMLAEE NVPLADA
|
| |