| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0857 |
|---|
| Symbol | |
|---|
| ID | 4173706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1010044 |
|---|
| End bp | 1010976 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638053860 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_660439 |
|---|
| Protein GI | 109897184 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.603238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA TTGGACCAGA CAAACTTATT TTTGCTGTCG ACGATGTCAC CGCGTGTAAG
CAGTTCGCCC TCGATTATGG ACTAACACAG CAAGATGATG TCAACTTTGT CGCCCTTGAT
GGCACAGGCA TTGAAATTCA CAGCAAAGAT AACGCCTCAC TTCCCGAAGC CCTCAGTACG
GGCTCTATGC TGCGTAAAAC GCTTTATGGT GTTGCTGATC AAGGGACAGT TGATGCAATT
AAGGCCGAGT TGTCAAAGGA TAGAGAAGTC AAAGTCTTGG ATGATGGCAG CATCGAGGCG
ATGGATGACA TGGGATTTGT ATTAGGGTTT CAAGTGACCA TTCGCCAAGC TCTCGACTTG
CCAGCTGAAA CCATTAATGC ACCGGGGGCA CCGTCTCAGC GCGGAGTGAA TAAAATTGGT
GTCAGTAAAG AGTTTGTGGC CAAACCTCGC AGCTTATCTC ATGTGGTTTA TTTTGTGCCT
GATGCCGTTA AAGCTGAAGC CTTTTTCGCT GAACGCCTTG GCTTTGTGAC CACCGACCGA
TTTAAACATA TGGGGCCATT TATGCGCCCT GCAGGCACGC AGGATCATCA CACATTGTTT
TTCCTCAATA CTCCGCCCCA CATGCAAGGT GTAGAGCATT TTACCTTCCA CATGAGTGGC
CCAACTGAAG TCGCTCAGGC TGGCAATGCC TTAATTGAAA AAGGTTATCA GAGTTTCTGG
GGACCCGGTC GTCATATCTT TGGATCCAAT TGGTTCTGGT ATTTCAAGAG TCCCTTTGGC
TGCAATATTG AATATGACGC CGATATGGAC TTACATGACG AGCAATGGGT TGCTCGCGAG
GCGATGCCTG GTGCAGATAA CTCACAAGTA TTTTTATTGC ACTATGAAGA GAAATGGGCG
CCAGGCGGAC CACCTCCGCC TCAAGCGCCT TAA
|
|---|
| Protein sequence | MNIIGPDKLI FAVDDVTACK QFALDYGLTQ QDDVNFVALD GTGIEIHSKD NASLPEALST
GSMLRKTLYG VADQGTVDAI KAELSKDREV KVLDDGSIEA MDDMGFVLGF QVTIRQALDL
PAETINAPGA PSQRGVNKIG VSKEFVAKPR SLSHVVYFVP DAVKAEAFFA ERLGFVTTDR
FKHMGPFMRP AGTQDHHTLF FLNTPPHMQG VEHFTFHMSG PTEVAQAGNA LIEKGYQSFW
GPGRHIFGSN WFWYFKSPFG CNIEYDADMD LHDEQWVARE AMPGADNSQV FLLHYEEKWA
PGGPPPPQAP
|
|---|
| |