| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0817 |
|---|
| Symbol | |
|---|
| ID | 4172314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 951300 |
|---|
| End bp | 952697 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638053820 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_660399 |
|---|
| Protein GI | 109897144 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT TTCAATTCTT TGCGCGCTTT CATGTACTGG TGTTGCACTT GCCTATCGGT
ATTCTCATGT TGGCAGCCCT GGTAGAGATG GTCGTTCGTT TTAAAGGCCA AGCACGAAGT
GCACTGCTCA ACATAGTTTG GTTCTGGGGT GCCGTTTCAG CTGTGGCTGC TTGCGTACTG
GGTTGGATGT TGTCTCAAGC CGATGGCTAC AGTGCAGAGG CCATTTTTAT ACACCGTAGT
TTTGGCATAT CTGTGGCGAT TACCGCTTGG ATTTGCTGGT GGGCATTTAA ACGTAACAGC
CCAGGGATAG TGATTTATAC CTTATCGAGC ATTGTGTTGG GGCTGTTATT TTCTACTGGC
CATTACGGCG CCAATATGAC CCACGGTGAA ACCTATTTAG TCGAGTACGC ACCGAACCCG
ATTCGCCAAA TAGCAGGTTT TGAACCACAT AAAGCGCCCA GAGCCCCAAT CACCAGCCTT
GCTCAAGCAG ATGTATATTT AGATGTCATT TCCCCTATGT TTGAAAAACG CTGTGCCAGT
TGCCACAACG ACAGCAAACA AAAAGGCGGC CTCAGCCTTG CCTCATTTGA AAGCCTGAAA
AAAGGCGGAA AAAGTGGTAA TACCGTCGTC GCAGGTAAGC CTGAACTCAG TGAACTTTAT
CAGCGCGTAA CCCTCGATCA TGACGAGAAA GGATATATGC CAGCAGAAGG CAAGAAGCCC
CTTAGCGCAG AGGAAATTGA CGTGATTAAG TGGTGGATAG CCACAGGTAT TCCTCATCAA
GGCCCTGTGA CTGATTTTGT GCAAAACAAA GAGCAAAAAG CCTTACTCAC TGACCTACTG
GCCATTAACC CAACCTCTTT AGCGGACATT GAGCCGATAA GCGACGAGCA AGCCCAACAG
TTAGTCGATG CTGGCTTTGT GGTTAAGCAA ATTGCCCAGC AATCCAACTA CTTAGACCTC
GACATGTCTA TTTCGCCATT GCCACTTACT GCCGACACGT TAGCCCTACT AACTGAGGTG
AAATCCCATG TGCTGTATTT GAATATTGCT AAGAAAGACG TGACCAAAAG CCACATGGAA
ACGATTGCCC AATTGCCTAA TTTGCAAAAA TTGCGTTTAG AGCACTCAAC GGTAACCACC
CGCGCTCTGG CTCCTCTGAA ACAAGCCGCT AATTTGTATT ACCTCAATCT TTACGCCACC
GAAGTAGATA ACGATGTACT GCCAATGCTC AATGAATTTG CCGCATTGCA ACAAGTGTAC
TTGTCAGCCA GCAAGGTCGA TGCGGAGGCA TTTGCTCGTC ACTCCCTAAA CGGTGACACC
AAGATGTATT ACAGCACGGT CGCAAGCAAC GACGCCGACA TTGCCCAAAA CAATAAACAC
GGATCGAAAG TGGAATAA
|
|---|
| Protein sequence | MDLFQFFARF HVLVLHLPIG ILMLAALVEM VVRFKGQARS ALLNIVWFWG AVSAVAACVL
GWMLSQADGY SAEAIFIHRS FGISVAITAW ICWWAFKRNS PGIVIYTLSS IVLGLLFSTG
HYGANMTHGE TYLVEYAPNP IRQIAGFEPH KAPRAPITSL AQADVYLDVI SPMFEKRCAS
CHNDSKQKGG LSLASFESLK KGGKSGNTVV AGKPELSELY QRVTLDHDEK GYMPAEGKKP
LSAEEIDVIK WWIATGIPHQ GPVTDFVQNK EQKALLTDLL AINPTSLADI EPISDEQAQQ
LVDAGFVVKQ IAQQSNYLDL DMSISPLPLT ADTLALLTEV KSHVLYLNIA KKDVTKSHME
TIAQLPNLQK LRLEHSTVTT RALAPLKQAA NLYYLNLYAT EVDNDVLPML NEFAALQQVY
LSASKVDAEA FARHSLNGDT KMYYSTVASN DADIAQNNKH GSKVE
|
|---|
| |