| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0810 |
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| Symbol | |
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| ID | 4172307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 941366 |
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| End bp | 942718 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053813 |
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| Product | carbohydrate-binding family 6 protein |
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| Protein accession | YP_660392 |
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| Protein GI | 109897137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.034958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACAG GTCGTTTTAA ATTACAGCTT CTAGGTTTAT GTTGTCTGTC TAGCTCCGCC
CTAGCGGATA ATCCGCTCGT TACTCATATG TTCACTGCAG ACCCTACTGC TCGGGTATTT
GAAAACAAAG TCTATGTTTA CCCTTCAACA GACGTGGTGT GTGAAGAGGG CTTTGGTAAC
AACGGGTTTT GTATGCCCGG CTATAACGTG TTTTCTTCAA GCAATCTTCA CGATTGGCAA
GACCATGGCA CTATAGTTGA CCAGACCGAT GTGCCTTGGG GGAAAAAAGA TGGTTTTGGC
ATGTGGGCAC CTGATGTCGT TGAGAAAGAC GGTACATACT ATTTTTACTT CCCTGATATC
CCGCTAGACG AAAGCGGGTT TAGGCGAATT GGTGTCGCTA CGGCGCAGTC TCCTGCGGGG
CCATTTAGCG TAATGGATGA CTATATAGCA GGCGTCAGTG GGATTGATCC TAATGTGTTT
ATTGATGACG ATGGTCAAGC TTACTTGTAC TTCGGCGGAG GTGAGAAACT CTATGTAGCC
AAGCTTAAGC CAAACATGGT TGAGTTAGCG AGCGAGCCTA AAGAAATTGC AGGGTTGCCA
TCTAAGTATA AAGAAGGGCC TTTCTTATTT AAGCGCAATG GCGTGTATTA TTTTACTTTT
CCTCATTCCC CAAGCGGCTC TGAAGAGTTG GCTTATGCGG TGGGTGACAG CCCCTTAGGG
CCCTTCGAAT ATCAAGGCAT GTTCATGCAA CGTTGGCGTG ATGGTATTTG GACCAACCAC
CACTCTGTTG TGGAATACGA AAACCAGTGG TACGTGTTTT ATCACCATCA CCAAATAAGC
CAAAATCAAC ATTTGCGCTC GATGCGAGCC GACAGATTAT TTTTTGACAA TAGCGGATAT
ATTCAACCAG TTACCCCCAC TGAGCGAGGA ATTGGCACCC CATTGGCGAC GGCAAAATTA
CAGATCGACA GATACAGTAT GTTGTCTGAT AAGGGAGTCA TAGTCTCAAA AGTGACTGGA
GGAGCCTTAC CAGCGAATTG GCAAGTTGAC TGGATAGAAA ATGGCGCATG GTTGAACTAT
GAGCGTGTTG ATTTTGAGCA AGGCCAAGCT AAGAAAATCG TCGTTCAAGC GGCTTCGAAA
ACGCAAGGGG GCACGGTCGA GGTGCGCTTA GGTGGCCCCG AAGGTGAAGT TATTGCGCAA
GTGCCAATCA GCAACACGGG TGGTTGGGAT AAATGGCAAG CATTTGAAGC GCCAGTTAAC
ACCAAGTTAA CTGGGGTTAA CAATCTCTCA TTTGTGTTTA AAGGCGCCGA ACAAGGACAC
TTATTTAACA TTGACTGGGT GAGCTTCAAA TAG
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| Protein sequence | MLTGRFKLQL LGLCCLSSSA LADNPLVTHM FTADPTARVF ENKVYVYPST DVVCEEGFGN
NGFCMPGYNV FSSSNLHDWQ DHGTIVDQTD VPWGKKDGFG MWAPDVVEKD GTYYFYFPDI
PLDESGFRRI GVATAQSPAG PFSVMDDYIA GVSGIDPNVF IDDDGQAYLY FGGGEKLYVA
KLKPNMVELA SEPKEIAGLP SKYKEGPFLF KRNGVYYFTF PHSPSGSEEL AYAVGDSPLG
PFEYQGMFMQ RWRDGIWTNH HSVVEYENQW YVFYHHHQIS QNQHLRSMRA DRLFFDNSGY
IQPVTPTERG IGTPLATAKL QIDRYSMLSD KGVIVSKVTG GALPANWQVD WIENGAWLNY
ERVDFEQGQA KKIVVQAASK TQGGTVEVRL GGPEGEVIAQ VPISNTGGWD KWQAFEAPVN
TKLTGVNNLS FVFKGAEQGH LFNIDWVSFK
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