Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0732 |
Symbol | |
ID | 4172189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 830725 |
End bp | 833514 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638053734 |
Product | UvrD/REP helicase |
Protein accession | YP_660314 |
Protein GI | 109897059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGGA ATGATAAAAA TTTGATGTTT TCAGATATTG AAAATAACCT GTGGAGTAAC AAATTTGCAC TCAAAAATAA CAGTCATGTA GATACTGACT TGAATGCTGT TTATCAATCG TTTATTAATA ACGGAACACT AAGCTATAAA GATGAACCAA AATCGTTAGT GAAGTTGCTA CAGGATCCAA AGCACGCAAA GTACCAATCT AAGTTGTTGA GTAGATATTT TGAAGAGCCA GAAAAATATC TAAAACTTGA TTGTGATTAT CTATCTATTC AAGTGGATTG CTCTCAAGCT AAAACTGTTG AACTATTTAC AAATAACGAT ACTGGGCTAC TAAAGCCGAG ATCCAATGCA CTACGTGAGA TTTTAACAAT CCGCCATGAG CCATGGGTTC ATAAAGCGAA TAACGGTCTT ATGAGTAAGG AAAATAGTGA GGGTGAGCGA TATCCAAAAG CTCCGATTTT TACATCTGTT TATCGAATAA AACTATTCAA TGATAGACGC AAGTTTTTCT ATATCTATAT CGCTGATGGG ACTAAGGGTC TAGAAGGTAA AAGAGTCCAG ATTGATTTTA TTCCAAGTCG ATTCACAGAC CTTGAACTCA GTATCCTATT CGGACACATC AAGTCAGTAC TGAAAAAAAG AGCCTACTCA CAGTTTATTG CAAAAGCGAG ATACAAGAGG GTTGATATAG CTTTTAACAT GCCAGGTGTA TTTCAACCGT TCGTGTTTCC TGCATACTTT GCTATCAATA GTATTTCGAC GGGCTCCTGC TGGCCTTTGG AAAAGCTTGT TGAAACATGC TACATAGGTA ATAGGAGAAG CAATCACTAC ATCGTGTACG ATAAAATATT AAAGGAGATG AAGACAGACA TTACCTTTTT TTTGATTGAA CATGCTGAAG TACAACAGGC TATGAAAAAG CTAGCAATGG TCACTCGCAT CGAAAGACGT TTCTATACAA ACCGTGCAGG TCACAATAGC AAGTTGTTTC AGAAAACCAT CCCGCTATCG GACCTACCTA CTCAGACAAT GCCACTGGAT GAAATTGCAA TAATAGATCC AATTGTAATG CGAAAAATTG ATAGAAAGCT TCTTTTAAAA ACTATTCAAG AGAAAAGTCG TTGGCAGGAT GGCGGTAATA AAGAAGCAGC TACTCGCCAA ATAAATGAAG AGCTTGAAGG GACCAAGGTG TTTCGGCTAG ATGAAACAGT GTTCAATACA ATGAAAACAA AGCTGCTAAC CGATTTATTG GAGACTATCC AAAACCCTAC TATTATAAAG ACAGATGAAC TTATTAAATT AATAAAATTC AATCACTTAA AGAAAAGTAT CGAATTACCA CTACCGTTAA CAAAAGTTAA AAAAATTTCA AAAGCTTATA AATCAGAGCA CCACAACATA GTAGTGAAGT CTGGTGCTGG TTGCGGTAAG ACGAGAGAAA TAGTAAAGCG AGTAGTTTGG CTCATAAGTG AGAAAGACGT TGATGCTAAT AAAATTACTA TACTGGCTTA CACAAATGAT GCGGTAAAAG AGCTTAAACA GCGAATAAGA AAAAAACTCG AAAAGCTAAA GCCGCTAAAC GGAAAAGACC GTTTTGAACT TCCAAATATC AAGACATTTA GTGCTTGGTG TGGTCAGCAA TTGAAACGAC ACGATAAAAA GCAATATGGC TCAAGTACTT ATATGCCGTC AGAGAAAGAA AAAGGCGCTT TAACTAAGAC CAGAGAATAC TATTTGCGTA ACATAGTTGC TTCTAATTCG ACGATTAAAG GCAAAGCAGA AGATTATGAT AGATTGTTCT CATTTAGTGC TAATGATTGT AAGCCAAATC TTGGTAACCT AATTGATTCT ATTAGCTCAA GACGTTCTAA AAAGTTAAAG GTTAACGCTA AAGATGCACG AACCGTTTAC GTCGCCTATA AGAAATTGAA AGAAAAACAT TCTCTATGGG ATTTCGATGA TGTTTTGACT TTTATGAACA AGCGCATGAA AGTTCCAAAA TTCTCCAACA AAGTATCTGA TGGTTGCGAG CATCTAATTT TAGATGAAAT GCAAGACTCC AATTTGGTGC AGTGGCAGAT CCTCGAGAAG CTATCAGCAG CAGGCATAAA GTTATTTTGT GTTGGAGATA CAGCTCAATC GATATTTGGA TTTAGAGGTG CTCGTCCGGC TAGGTTTGAA AATTATGCAG AGAACACAGA AGTTAAGCGC TTTACCTCAA GACATAGCTA TAGGTCTACC AGTCGAATTC TTCGACTCAC TAACTTTGTC CGACGTTACA CTCAATCGTT ACCAAAAAAA CTAACAACCG GAAAATCAGA AGGAGATGCA CCGGAACTTA TCGAGCATGA TGATTTGCAA GGACTTGTTA ATGACTTAAC AAGTAAGTTG ACTCAGTTGT TAGAAAGATC GCACAAGACA GAGGCAATAC TCATTTTAGC TAGGACAACT AAGGTAGTTG ATACGATAAG CGATGCAATT ACTTTGGCGC TTAAAACCGA AAAGTATATG CCACTGTTGA AAAGAATTTC TGTAATGACG ATGCATAAAG CGAAAGGACT AGAAGCCGAT GTTTGTTTTG TGGTCGATCC TCGCTATTCT CGCTCATCAT ACGACACCAA AGATGAGTAT CTAAGGCTTA TATATGTTGC TCTGACTCGA GCGCGCACAA AACTTATAAT TTGTCGCAAA AACACCTCAG TCAATTTTTA TACAGATGGT CAGGAAGGTG AACCGGATAT CATTGATATT CTGAAAGAGA ATACGTTTTT GTTTGCGTAA
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Protein sequence | MTRNDKNLMF SDIENNLWSN KFALKNNSHV DTDLNAVYQS FINNGTLSYK DEPKSLVKLL QDPKHAKYQS KLLSRYFEEP EKYLKLDCDY LSIQVDCSQA KTVELFTNND TGLLKPRSNA LREILTIRHE PWVHKANNGL MSKENSEGER YPKAPIFTSV YRIKLFNDRR KFFYIYIADG TKGLEGKRVQ IDFIPSRFTD LELSILFGHI KSVLKKRAYS QFIAKARYKR VDIAFNMPGV FQPFVFPAYF AINSISTGSC WPLEKLVETC YIGNRRSNHY IVYDKILKEM KTDITFFLIE HAEVQQAMKK LAMVTRIERR FYTNRAGHNS KLFQKTIPLS DLPTQTMPLD EIAIIDPIVM RKIDRKLLLK TIQEKSRWQD GGNKEAATRQ INEELEGTKV FRLDETVFNT MKTKLLTDLL ETIQNPTIIK TDELIKLIKF NHLKKSIELP LPLTKVKKIS KAYKSEHHNI VVKSGAGCGK TREIVKRVVW LISEKDVDAN KITILAYTND AVKELKQRIR KKLEKLKPLN GKDRFELPNI KTFSAWCGQQ LKRHDKKQYG SSTYMPSEKE KGALTKTREY YLRNIVASNS TIKGKAEDYD RLFSFSANDC KPNLGNLIDS ISSRRSKKLK VNAKDARTVY VAYKKLKEKH SLWDFDDVLT FMNKRMKVPK FSNKVSDGCE HLILDEMQDS NLVQWQILEK LSAAGIKLFC VGDTAQSIFG FRGARPARFE NYAENTEVKR FTSRHSYRST SRILRLTNFV RRYTQSLPKK LTTGKSEGDA PELIEHDDLQ GLVNDLTSKL TQLLERSHKT EAILILARTT KVVDTISDAI TLALKTEKYM PLLKRISVMT MHKAKGLEAD VCFVVDPRYS RSSYDTKDEY LRLIYVALTR ARTKLIICRK NTSVNFYTDG QEGEPDIIDI LKENTFLFA
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