| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0688 |
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| Symbol | |
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| ID | 4172663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 785528 |
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| End bp | 788209 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053690 |
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| Product | bacteriophage replication gene A |
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| Protein accession | YP_660270 |
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| Protein GI | 109897015 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.754917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCACG TTCGCCAGCT GCCTAACCCG TTCATACCGG CCATGCACCA ACACTTGGTG
CAGTGGCCTG TTCGCACGTC TGGTACAAAT GCCGACGGCA CCCGCTATTT TGCGCCTATT
GATTTATCAG CCACCCAAGC TGAAAAAGCG CTGTGGAAAT TAGGCGACGA CGGCGACCGT
TATCACCGCT CTAAAATACT GCGCGGTTTG CCGCAATCAG TGGGCAATGC AGTGGCCACG
GTTTACAAAG ACATGTACCG CAGCGACAAC AGCAAAAAAG GCGAAGCCGT AAAACGCCAA
CGGGCTAACC GCTATTTAAC TGGCATATAC AACCGCCACT TATCAAGCAA AATGGCTGTG
CTGTGCCAAA ACCCGCTTAT TTTCAAACCA AGCGACATGA TCGTTGATGA CGAATACTTA
AACATGACGT TCGGCATAGC CCCTGAACTA AAAAGCCTGA ATAAAAAGGC CCAAAGCGCA
CACGAAAACT ACTTGTTAGA TTTGCTCGAA TACTGGCAAG AATCAGAGTT GATGCCCGTT
AAGCGCACCA AAGAAGAAAG CGAACCCAGC GTGGTTTACC ACGAAGACGG CACCACCACG
ATTAAAACCG CCAAGTCAGA CAACCACCAA GCCAGCAGCC ATGACCTGCA AAACTTTTGG
AACCGCAGCG ACAACGAATT GCGCGACTAC GCATTCGACA TGGTGCGCAT GGTGTATCAA
TTCTTACAAA GGCTGGTAAT AGCAGGGCGC GATCACTTCT CAGAAAACGA CCTGCTTAAA
CGTATTTATC AAGTGGTGTG CGCCATACCA AACCAAATGT GCATACGCGA AAAATACCAA
GACATATCAA TCGAAAAATT CACCACAGAA CATGCCGACA TTGGCCTAGC CCGTTTATTG
TGTGAAAAAT GGTGGCTGCG TAAATTACGC AAAGTACACC GCCAAAAGCA CGAAGAAATC
GCCATAGCCT GCGGCGTAGT GCACAGCGGC ACCCAGTGTT ATGTCAGCAA CGACACCTAC
AAATACTTTG AAAGACGCCA ACAAGAAAGC CTAAAAGTGC TAGGTGATAT GGTTGCCTAC
AACGAAGAAA GCGACCAAGA AGTGCCGCTT TTATCCCTGA TTGAAAAGTC AGTCTCTAAC
CCTAAAATTC GTCGCCACGA ACTAATGACC CGCATGCGCG GCTGCGAAGA CTTCGCCATA
GAACAGGATC ACGTCGGGCT ATTCATCACC CTAACCGCAC CCAGTAAATG CCACCCAACC
AGTAGCCGAA AGTTAAAGGG TGAAAAGTCG ATTATCGCCA ACCCGAAATA TAACGGCGTT
ACCCCAGACG AAACCAACCG CTACTTAAAC AACGTGTTCG CCCTTATTCG CTCAGCGCTA
GACAAACTCA ATATCAAGCC TTACGGGTTC AGAGTCGTTG AGCCCCACGA AGACGAAACA
CCGCACCAGC ACTACATGCT GTTCTGCACT GACAAACAAC AGAACACCAT AATTGATATG
TTTTATCACT ACGGTTTGCA AATAGACGGC AACGAAGCGG GCGCCAAAAA ACACCGCGTG
ACCGTGGAAA AAATGGACCC CAAAAAAGGC AGCGCCACCG GGTACATAGC CAAATACATT
TCAAAGAATA TTGACGGTTA TCAAACCGAC GGCAAAGAAA TAGGCGAAGA CAACTACGGC
AACCCAGCCG CCGAAGCAGC CAAGCGCATT ACCGCATGGC GCAAGTGCTG GGGCATTCGT
GCCTTTCAAC CGTTTGGGCA ACCCTCAGTA GGCATTTGGC GAGAACTGCG CAAGTTCAAC
AGCGAAGAAA CAGGCCAATG GCGCGAAAAG CTCAACACAG AAAAAGCAGG CACCTATAAC
AGTCACGTTA TTGCCTGGTT AAATCACACG CGCCCGGCAA AAGCCTGCGC CAACGACGAA
ATAGAAAAAT GCCGTTTCTG GGCAGACACA GGCAAGTGGG ACAAATTCAT ACAAGAAATG
GGCGGGGTCA ACACAAAGCG CGATAACCGC CCCGTATGGT TGCTAAAACC AAACGAGCCC
GTGATTAACC GCTACAACGA AGCCGTGCCG CACAAAGCCA TTGGTGTAGA AAGCATCACC
GGCAGCATTA TTACCAGTGA TAAAACATGG ACCCTACACC GCAAAGGCGA AAGCCCTAAA
CGTATCGCCC TTGACGCTTT AAAAGCAGCG CGCAGCGGTG CGTCGTCTTT TGATTCTGCT
CTTAGCGAAG CGGGAACCGC GCAGCCTTGG AGTGCTGTCA ATAACTGTAC CGACAGCACC
TTAGAGCAGC CCAATAAACC CGAAGAACCC GCTTTTACCC CCATGTTTGC CTATCCAAAA
CCACCGGTTT TTGAACAAGC ACAAGAATAC CTAAGCGAAA TAAGCGAAGA AGACCAAGAA
CTAGCCGAGT TTTTACTTAA TAGAACACCC GCCCCATTAA TCAAGGGGCA AATTCAAAGA
CTTAAGAAGG GCACTAACCT GCGTTTGAGC GCCAATAAAG CCTTAAAAAT AGTCGAATAC
GAAAACGGCG AGAAACACCT TACCCAAACC CACGTAACCG ACCCGAACGA CGATTGGTTT
ATAGAAGAAG AAGAACCCTT CGACCCCAAC AAACCGATTT TTACCGCCGA ATCAGGCCTA
AAAATCATCA ACGGTAAACT GCACATAGGA ACGGCCGCAT GA
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| Protein sequence | MHHVRQLPNP FIPAMHQHLV QWPVRTSGTN ADGTRYFAPI DLSATQAEKA LWKLGDDGDR
YHRSKILRGL PQSVGNAVAT VYKDMYRSDN SKKGEAVKRQ RANRYLTGIY NRHLSSKMAV
LCQNPLIFKP SDMIVDDEYL NMTFGIAPEL KSLNKKAQSA HENYLLDLLE YWQESELMPV
KRTKEESEPS VVYHEDGTTT IKTAKSDNHQ ASSHDLQNFW NRSDNELRDY AFDMVRMVYQ
FLQRLVIAGR DHFSENDLLK RIYQVVCAIP NQMCIREKYQ DISIEKFTTE HADIGLARLL
CEKWWLRKLR KVHRQKHEEI AIACGVVHSG TQCYVSNDTY KYFERRQQES LKVLGDMVAY
NEESDQEVPL LSLIEKSVSN PKIRRHELMT RMRGCEDFAI EQDHVGLFIT LTAPSKCHPT
SSRKLKGEKS IIANPKYNGV TPDETNRYLN NVFALIRSAL DKLNIKPYGF RVVEPHEDET
PHQHYMLFCT DKQQNTIIDM FYHYGLQIDG NEAGAKKHRV TVEKMDPKKG SATGYIAKYI
SKNIDGYQTD GKEIGEDNYG NPAAEAAKRI TAWRKCWGIR AFQPFGQPSV GIWRELRKFN
SEETGQWREK LNTEKAGTYN SHVIAWLNHT RPAKACANDE IEKCRFWADT GKWDKFIQEM
GGVNTKRDNR PVWLLKPNEP VINRYNEAVP HKAIGVESIT GSIITSDKTW TLHRKGESPK
RIALDALKAA RSGASSFDSA LSEAGTAQPW SAVNNCTDST LEQPNKPEEP AFTPMFAYPK
PPVFEQAQEY LSEISEEDQE LAEFLLNRTP APLIKGQIQR LKKGTNLRLS ANKALKIVEY
ENGEKHLTQT HVTDPNDDWF IEEEEPFDPN KPIFTAESGL KIINGKLHIG TAA
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