| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0629 |
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| Symbol | |
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| ID | 4173651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 728129 |
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| End bp | 729325 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053632 |
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| Product | benzoate transporter |
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| Protein accession | YP_660212 |
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| Protein GI | 109896957 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TATTTCGCGA TCTGAGTTTT TCCGCCATTA GCGCTGGCTT TATTGCCGTG
TTAGTGGGAT TTGCCAGTGC TGTGGCCATA GTGTTTCAGG CCGCCCAAGC CGCTGGCGCC
TCTCACAACA TGATAGTGAG TTGGGTGTGG GCGCTAGGTG TAGGTATGGG CGTTGGCTGC
TTGGGGTTAT CATGGTATTA CCGTCGGCCG ATCATAATAG TGTGGTCGAC ACCTGGCGCT
GCATTGCTGG CGACGAGCCT TGCAGGAGTG AGTATCGAAA ATGCCATTGG GATCTTTCTT
TTTGTCGCGC TTTTAACCTT AGTAACGGGT ATTTCAGGAT GGTTCGACAA TCTGACGAAA
CGCATTCCGA TGCCGTTAGC CAGCGCTATG TTAGCGGGTA TTCTATTGCA ATTTGGCCTC
GCCATTTTTA GCTCTTTTAC TCTCGAGCCT ATGCTCGTTG GCCTTATGAT ACTCAGTTAC
TTTATGGCTA AAAGAGTGGC CCCTCGTTTT AGTATTTTGC TGGTTTTAGT CACTGGCGTG
TTGTATGCCC AATACGCTGA TATGTTTGAT ATGAGTGCGA TAGATGTATC CGCAGCCAGG
CCTGTTTGGG TATCGCCAAC ATTCGATTTA TCACTCTTGA TCGGCGTGGG CTTGCCCTTG
TTTATTGTCA CTATGACCTC GCAAAATTTG CCCGGCATGG CCGTTTTAAA AGGCAGTGGC
TACACCGAGC AACCAATATC CCCTATTATC ACCACCAGCG GGGCGCTTAA TTTAGTACTA
GCCCCCTTTG GTGGTTTCAG CTTTAACCTA GCGGCAATTA CCGCCGCTAT TTGTACCAGT
GAGGAAGCCC ATGCCGATCC TGCCAAGCGC TACATTGCAG GTATATCGGC AGGGGTCTTC
AATATAGTTG CAGGATTAGG TGCCACCGTG GTGGTCAGTT TATTTGCGGC ATTTCCAGTT
GCGCTAATAT CAACCTTAGC CGGCCTTGCT TTGCTGGGTA CAATAGGCGC AAGCCTCGTT
AACTCAGTAT ACGATCCTAA GTATCGCGAC GCGGCCGTAT TGACCTTTTT GGTGACCGCT
TCGGGCGTAT CATTTTTCGA TATCGCATCT GCATTTTGGG GACTAGTGGT GGGTATGCTG
ACATTGCTCT TTAGCGTAAA AACTAAATCT GACACACACG CTAAGCAGCA AAAATAA
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| Protein sequence | MKDLFRDLSF SAISAGFIAV LVGFASAVAI VFQAAQAAGA SHNMIVSWVW ALGVGMGVGC
LGLSWYYRRP IIIVWSTPGA ALLATSLAGV SIENAIGIFL FVALLTLVTG ISGWFDNLTK
RIPMPLASAM LAGILLQFGL AIFSSFTLEP MLVGLMILSY FMAKRVAPRF SILLVLVTGV
LYAQYADMFD MSAIDVSAAR PVWVSPTFDL SLLIGVGLPL FIVTMTSQNL PGMAVLKGSG
YTEQPISPII TTSGALNLVL APFGGFSFNL AAITAAICTS EEAHADPAKR YIAGISAGVF
NIVAGLGATV VVSLFAAFPV ALISTLAGLA LLGTIGASLV NSVYDPKYRD AAVLTFLVTA
SGVSFFDIAS AFWGLVVGML TLLFSVKTKS DTHAKQQK
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