Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0605 |
Symbol | |
ID | 4174093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 697954 |
End bp | 698583 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638053608 |
Product | hypothetical protein |
Protein accession | YP_660188 |
Protein GI | 109896933 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.313506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAA CATCTCCTTA TTTGATCCCC AGCGCACCAG TCACCTTTGA AGAAGAAATA AAACGTAGCC GGTTTATCAC CCTACTCTCC CATACACCTA GCGCTGCAGA AGCCAAAGCG TTTATCCAAC GAATAAAAAA CGCGCACCCA CAAGCTGGGC ACCATTGTTG GGGCTTTGTG GCTGGCCCAC CCGCGGACTC GATGCAGCTA GGTTTTAGTG ATGATGGTGA ACCAAGCGGC ACCGCTGGTA AGCCGATACT CGCTCAATTG CAGGGCAGCC ATATAGGTGA GATAACCGCA GTGGTGATCC GTTACTCTGG TGGAACGAAG TTGGGTACAG GAGGCTTAGT GAAAGCTTAT GGCGGCGGTG TTAAACAAGC TCTGTCGCTG TTGACCACCA AAACACGTGT AGCAACAGCT CATATTGCCA TTGAATACGA TTACGCCTTA CAGGGCGTTA TAGACGATTT AACGCGTGAA TATGACCTTT GTATTACGTC TTCGAGGTTT ACAGAAGTAG CCTCTATCGT GGTTTCAATA GAGGCTATTC AGGTTACAAG CTTATTGAAA AAAGCCTCTT TGTTTGAGAA CACAAAGCTC AGAGCACGTC ACCTAGAGCC CAAAGAATAA
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Protein sequence | MAITSPYLIP SAPVTFEEEI KRSRFITLLS HTPSAAEAKA FIQRIKNAHP QAGHHCWGFV AGPPADSMQL GFSDDGEPSG TAGKPILAQL QGSHIGEITA VVIRYSGGTK LGTGGLVKAY GGGVKQALSL LTTKTRVATA HIAIEYDYAL QGVIDDLTRE YDLCITSSRF TEVASIVVSI EAIQVTSLLK KASLFENTKL RARHLEPKE
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