| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0560 |
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| Symbol | |
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| ID | 4172247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 649405 |
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| End bp | 650184 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053562 |
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| Product | hypothetical protein |
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| Protein accession | YP_660143 |
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| Protein GI | 109896888 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTGGT TGGCAAGTAT CGGACGCAAT ACAATCGACA CAGTCGGTTC GTTTGGACGT
GCTTTTTTGA TGTTGATGGG GGCTATTATC GCCAAACCTC AATTTATCAA AAACACGCCA
TTAACAATAA AACAAATTTA CGTGGTTGGT GTTCAGTCAC TGTTAATCAT TGTGGTATCA
GGATTGTTCA TTGGCATGGT TATGGCGCTA CAGGGCTATA CCATATTAGT AGACTATGGC
GCCGAAGGCA GCTTAGGTCC GATGGTCGCA CTTTCTTTAC TGCGTGAATT AGGCCCTGTT
GTAACAGCAT TGCTATTTGC TGGTCGCGCT GGCTCAGCTT TGACAGCAGA AATTGGACTG
ATGAAAGCCA CCGAACAACT CAGTAGTTTA GAAATGATGG CGGTAGACCC ACTTCGTCGC
GTAGTTGCAC CGCGTTTATG GGCAGGCATT ATTTCAATGC CAATGTTGGC TCTTATTTTC
AGCGCGGTAG GTATACTGGG AGGTCATTTA GTTGGCGTTG ACTGGTTAGG CGTCGATGTA
GGTAGTTATT GGTCTATCAT GCAATCGAGT GTCGACTGGA ACGAAGATGT CGTGAACGGC
ATCATTAAAA CCCTCGTATT CGCCTTTGTG ATTACTTGGA TAGCTATTTT TAAGGGTTAT
GATGCAGTTC CTACATCGGA AGGGATAAGC AAAGCCACCA CAGAAACCGT GGTATTTTCA
TCTTTAGCAG TGTTAGGACT CGACTTTATC CTGACTGCAT TAATGTTTGG TATAGAGTAG
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| Protein sequence | MQWLASIGRN TIDTVGSFGR AFLMLMGAII AKPQFIKNTP LTIKQIYVVG VQSLLIIVVS
GLFIGMVMAL QGYTILVDYG AEGSLGPMVA LSLLRELGPV VTALLFAGRA GSALTAEIGL
MKATEQLSSL EMMAVDPLRR VVAPRLWAGI ISMPMLALIF SAVGILGGHL VGVDWLGVDV
GSYWSIMQSS VDWNEDVVNG IIKTLVFAFV ITWIAIFKGY DAVPTSEGIS KATTETVVFS
SLAVLGLDFI LTALMFGIE
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