| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0514 |
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| Symbol | |
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| ID | 4173458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 597181 |
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| End bp | 598380 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053516 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_660097 |
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| Protein GI | 109896842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATT GGCAAAGCGC ATTTGCTGAG CTTCAGCGTG GTGCTGAAGA AATATTGTTG
GAAGAAGAAC TGATTGCCAA GCTAAAAGAA GGCAAGCCGT TAAAAATTAA AGCAGGCTTT
GATCCTACAG CGCCAGACTT ACACCTAGGT CATACGGTTT TAATTAATAA ACTGCGGTCT
TTTCAGCAGC TTGGGCACGA AGTTATCTTT CTGATCGGTG ATTTCACCGG AATGATAGGT
GATCCCACAG GCAAAAATGT TACTCGTAAG CCATTGACCC GAGAAGACGT GCTAGCGAAT
GCTGAAACCT ACAAAGAGCA GGTATTCAAA ATTCTTGATC CGGCTAAAAC CACGATCCGT
TTTAATTCAG AGTGGATGGA AGGCCTAGGG GCCTCAGGTA TGATCAAGTT AGCCTCAAGT
CAAACTGTGG CACGTATGTT AGAACGAGAT GATTTTAAAA AGCGCTATGC CAATGGCCAA
CCTATCGCTA TTCATGAGTT CTTGTATCCG CTCGTTCAAG GCTGGGATTC TGTTGCCCTT
GAGTCTGATG TTGAATTAGG CGGAACAGAT CAGCGTTTCA ACTTATTGAT GGGCCGTGAA
TTGCAAAAAG GGCAGGGGCA ACGACCACAA ACTGTTTTGA TGATGCCGTT GCTTGAAGGG
TTAGACGGCG TACAGAAAAT GTCTAAGTCC CTTGGAAACT ATATTGGTAT CACCGATTCA
CCAAGCGATA TGTTCGGTAA AATCATGTCG ATTTCAGATG ATTTGATGTG GCGCTACTAT
GATTTACTTA GCTTTAAGGC CATTGAAGAA ATTGCGCTTT ACAAAGAGCA AGTCGCTGGG
GGCACGAACC CAAGAGACAT AAAAATTGCG CTGGCTAAGG AAATTATTGC GCGTTTTCAC
GATGATGCTG CTGCAGAAGC CGCTCACCAT GAATTTATCC AACGCTTCCA GAAAAATGCC
ATCCCAGATG AGATGCCTGA ATTCACTTTT GAGGCAGGTG CAGAAGGTAT GGCTGTTGCC
AACTTGCTTA AAGAGGCCGC TTTAGTGGCA TCGACTTCAG AAGCGATGCG TATGATTAAA
CAGGGCGCGG TTAAAATGGA CGGTGAAAAA GTGGCAGACC AAAAAGCGAT TTTTACCTCG
TTACAAGAAG CCGTTTTCCA AGTGGGCAAA CGCAAATTTG CGCGAGTGAC GCTAAGCTAA
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| Protein sequence | MADWQSAFAE LQRGAEEILL EEELIAKLKE GKPLKIKAGF DPTAPDLHLG HTVLINKLRS
FQQLGHEVIF LIGDFTGMIG DPTGKNVTRK PLTREDVLAN AETYKEQVFK ILDPAKTTIR
FNSEWMEGLG ASGMIKLASS QTVARMLERD DFKKRYANGQ PIAIHEFLYP LVQGWDSVAL
ESDVELGGTD QRFNLLMGRE LQKGQGQRPQ TVLMMPLLEG LDGVQKMSKS LGNYIGITDS
PSDMFGKIMS ISDDLMWRYY DLLSFKAIEE IALYKEQVAG GTNPRDIKIA LAKEIIARFH
DDAAAEAAHH EFIQRFQKNA IPDEMPEFTF EAGAEGMAVA NLLKEAALVA STSEAMRMIK
QGAVKMDGEK VADQKAIFTS LQEAVFQVGK RKFARVTLS
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