Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0496 |
Symbol | |
ID | 4172723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 574297 |
End bp | 575301 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053499 |
Product | aspartate carbamoyltransferase |
Protein accession | YP_660080 |
Protein GI | 109896825 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTCG AAGGTAGTCA TATTCTTTCC GTTAATCAGT TCGACCGTGA ATCGATAGAA CGCGTATTCG ATGTCGCTAA TCAAATGGAG CCCTATGCAA AACGCCAAAA ACGGACCACG GTACTTGATG GTGCGATCCT CGGAAATTTA TTTTTCGAGC CTAGCACACG TACTAGAGTC AGTTTCGGTA CCGCTTTTAA CTTACTCGGT GGTGAGGTAC GTGAAACCAC TGGTATGAGT AACTCCGCAT TGGCCAAAGG CGAGTCTTTG TACGATACCG CTCGTGTACT CAGTGGCTAC TCCGATATCA TCACTATGCG CCACCCTGAT TCAGGCTCAG TCGCTGAATT TGCCCAAGGT AGTCGTGTGC CAGTGATAAA TGGTGGTGAT GGCGCTAACG AGCACCCTAC GCAAGCCCTT CTTGATTTAT ATACTATTCA AAAAGAACTG CTATACCATG GCGGCAACAT TGACGGCCTG CATATCGCCA TGATTGGTGA TCTGAAATAT GGCCGAACCG TACACTCGTT AAGTAAATTA CTTTGTCTGT TCAAAAATAT TCGCTTTACG CTTATTTCAC CCAAAGAGCT GGCAATGCCG GATGCGATTC TAAGTGCCAT TGAAAATGCG GGGCACAGCT ACACTATCAG TGAAACCCTA GAGGGTAACT TTGATGCGGA TATCTGTTAT CAAACCCGAG TGCAAGAAGA ACGTTTTGGC TCACAAGAAG AGGCAAATTT GTACCGGGGG AAATTCCGCT TGAATCAGCA AATTTACACC AAGCACTTTC AATCTAAAAC AGTGATTATG CATCCGTTAC CGCGAGATTC ACGCACGGAA GCCAATGAGT TAGACAACGA TTTAAATATG AACCCAAATC TGGCCATCTT TCGCCAAACC GACAATGGCG TACTGGTAAG AATGGCGTTG TTTGCCTTGA CCTTAGGGGT TGAAAATATC GTTAGCAAAT TCGACAAAGA AGTGCATTGG TACAGCGGCC ACTAG
|
Protein sequence | MKFEGSHILS VNQFDRESIE RVFDVANQME PYAKRQKRTT VLDGAILGNL FFEPSTRTRV SFGTAFNLLG GEVRETTGMS NSALAKGESL YDTARVLSGY SDIITMRHPD SGSVAEFAQG SRVPVINGGD GANEHPTQAL LDLYTIQKEL LYHGGNIDGL HIAMIGDLKY GRTVHSLSKL LCLFKNIRFT LISPKELAMP DAILSAIENA GHSYTISETL EGNFDADICY QTRVQEERFG SQEEANLYRG KFRLNQQIYT KHFQSKTVIM HPLPRDSRTE ANELDNDLNM NPNLAIFRQT DNGVLVRMAL FALTLGVENI VSKFDKEVHW YSGH
|
| |