| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0492 |
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| Symbol | |
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| ID | 4172719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 568956 |
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| End bp | 570224 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053495 |
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| Product | Rh-like protein/ammonium transporter |
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| Protein accession | YP_660076 |
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| Protein GI | 109896821 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.905318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAG CATTTCACCT TCAATACGCT ATGGATACGT TTTATTTCCT AGTGTGTGGC
GCACTCGTAA TGTGGATGGC CGCTGGCTTC TCTATGTTAG AAGCGGGTTT AGTTCGCTCA
AAGAACACTA CCGAAATACT CACTAAAAAT ATCGCGCTTT TCGCGATTTC TTGTCTTATG
TACTTAGTGT GCGGTTACGC CATTATGTAC GGCGGCGATT ACTTCTTAAC AGGCATCGAA
AGTGTTGATG TTACTGAAAC TCTAGGCGAA TTTGCTGGTC GTGAAGATGG TTTTGAAGGT
GGTTCGATTT ACTCGGGCGC ATCAGATTTC TTCTTCCAAG TTGTATTCGT AGCAACTGCT
ATGTCAATTG TATCCGGCGC GGTAGCTGAG CGTATGAAAC TTTGGGCTTT CCTTGCTTTC
GCCGTTGTAA TGACCGCATT CATCTATCCT ATGGAAGGTG GCTGGACATG GGGTGGTAAC
TCTGTATTTG GTCTATATAG CCTAGGCGAT GACTTTGGTT TCTCTGATTT TGCAGGTTCA
GGTATCGTGC ACATGGCTGG TGCAGCTGCA GCGCTTGCAG GTGTATTGTT GCTGGGTGCT
CGTAAAGGCA AATATACTGC TGATGGCAAA GTAAACGCTA TCCCAGGTGC AAACCTACCT
ATGGCGACAT TGGGCACGTT TATTTTGTGG ATGGGTTGGT TCGGTTTCAA CGGTGGTTCA
GTATTAAAAC TGGGCGACAT TGCTAATGCT AACTCAGTGG CTATGGTGTT CTTAAACACA
AATGCTGCAG CAGCAGGTGG CGCAGTAGCG GCCTTAGTCC TGGCTAAAAT TTTGTTTAAG
AAAGCGGATT TAACCATGGT GCTTAACGGT GCATTGGCTG GCTTAGTCGC CATTACGGCT
GAGCCTTCAA CACCATCGGC ATTGGGCGCA ACTATTATTG GTGCTATTGG TGGTGTGATT
GTAGTGTTCT CTATTATCAG CCTTGATAAG CTGAAAATTG ATGATCCAGT AGGTGCTATC
TCTGTACACG GTGTGGTAGG TTTCTTCGGC GTAATGGTGG TGCCTGCAAC GAATGATGGC
GCGACTTATC TTGGTCAATT CGTTGGTGCT ATGACTATCT TCGTATGGGT ATTCTTCGCT
AGCTTGATTG TTTGGGCAAT CCTCAAAGCT GTAATGGGTA TCAGAGTGAC TGAAGAAGAA
GAGTTCGAAG GTGTTGATAT TAGCGAATGT GGATTAGAAG CCTACCCAGA CTTTACCAGC
GGCCGTTAA
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| Protein sequence | MEQAFHLQYA MDTFYFLVCG ALVMWMAAGF SMLEAGLVRS KNTTEILTKN IALFAISCLM
YLVCGYAIMY GGDYFLTGIE SVDVTETLGE FAGREDGFEG GSIYSGASDF FFQVVFVATA
MSIVSGAVAE RMKLWAFLAF AVVMTAFIYP MEGGWTWGGN SVFGLYSLGD DFGFSDFAGS
GIVHMAGAAA ALAGVLLLGA RKGKYTADGK VNAIPGANLP MATLGTFILW MGWFGFNGGS
VLKLGDIANA NSVAMVFLNT NAAAAGGAVA ALVLAKILFK KADLTMVLNG ALAGLVAITA
EPSTPSALGA TIIGAIGGVI VVFSIISLDK LKIDDPVGAI SVHGVVGFFG VMVVPATNDG
ATYLGQFVGA MTIFVWVFFA SLIVWAILKA VMGIRVTEEE EFEGVDISEC GLEAYPDFTS
GR
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