| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0466 |
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| Symbol | |
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| ID | 4171809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 541570 |
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| End bp | 544911 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053469 |
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| Product | amidohydrolase |
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| Protein accession | YP_660050 |
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| Protein GI | 109896795 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.83396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAGA ATCTTATCAA CGTCGCGCTA TTTAGCACGA TGCTAAGCTT AAGCGCTGAC
GCATTCAGTC GCGTTGAGCT TCAAAAGGCT AAGCAAAATG CACTCACAGA AGAAAGCAGC
GAAGCAGAAT GGGACGTATT AAATCCCCCC TTTAACTTAA ACGAAGTCAC CATCAATACT
GATGAAACGA CTTGGTCTAG TCTTGATGTT TCGCCAAATG GTGAGAAATT TGTTTTTGAT
ATGCTAGGCG ATCTATATGT CAGCTCTATC GGCGGCGGCG AGGCCACCTC GTTAACGCAA
GATTTCGCAT GGAATATCCA ACCTACGTTC AGCCCTGATG GCAAAAAAAT AGCGTTTATA
TCCGATCGCG GTGGCATGTC GAACGTTTGG GTGATGAACA GTGACGGCAG CAATTTAGTG
CAAGTAACCA AGGAGAAGAA TAACTTAATT CATTCTCCTA AATGGAGCCC TGACGGCCAA
TATATAGTGG CGAATAAAGG GATAATGTCT AGCCGCAGTA TTCCGGCAGG CGAAATCTGG
CTATATCATC ACTCTGGCGG TGATGGCATG GTGCTTAAGA AACGTGTGCA TGGCAACCCA
GATCAAAAGA ACATAGCGGA CCCGGCTTTC TCCCCCGATG GGAAATACCT GTATTACACC
CAAGATGTAT CACCCGGTAG CACCTTTGAT TATAACCGTG ACCCGCTAAA ATCTATCTTC
GCCATTACTC GTTACGATAT GAACACAGGC GAAGAAGAAC GGTACATCAG CGGCACTGGG
GGAGCTGTTG TTCCTACCCC CTCTCCAGAC GGTAAGCAGA TTGCTTTCAT ACGCAGAGTT
AAAGAGAAAA CCGGACTGTT TGTTAAAGAT ATTGCCACAG GTGTTGAATC CCTTCTCTAC
TTAAAACTTG AACGTGACAT GCAAGAAGGG TTCGGCTCAG AAGGGTATTT TCCTTACTTT
GATTGGATGC CCAATTCAAA ACGTATCGTG TTTTGGACCG GTGGTAAATT CCACTCAATT
GATGTGAAAA CGCAAGCAGT TAAAGACATT CCTGTATCAG TAAAAGCAAC CGTAAAATAC
GCAGATGCAG TGCGTTTTGA CGTTGATGTG GCACCCGAAA AATTTGCGGT AAAAATGGCG
CGCTGGGCGC AGAAATCCCC TAATGGGCAA AACATCGTTT TTCAGGCGCT TGGTAAGCTT
TATATTAAAG AGATCAAAAG CGGTAAAGTG AAACGCCTTA CTCGGCAGAA CGATCATGAC
GAGTACTATC CTCGCTACTC TCACGATGGT AAAAAAATTG TTTTCACCAC ATGGAACGAT
AAAGACTTAG GCAGCGTGCG CACTGTATCC GCTTCCGGTC GTTCAGAAAA AGTAATCAGC
AAAGAGCCTG GGCACTTTAT CGAGCCAAGC TTCTCTACGG ACGACAAACT GATTACCTAC
AATAAGAAAA CTGGCGGCTA TTTATTGGCC CCAGAATACT CTGTGGAACC TGGTATCTAT
ACCGCTACGG TAAAGGGTGA AAAACACAGG CGTGTCGCCA AAAACGGTAG CGCGCCACAT
TTCGCTGGTG ACAACAGCCG GGTGTATTTT ACCGAGTCTG TATCTGGCAG TGATTACCCT
GAACAACAGT TAGTCAGTGT TGACCTCAAT GGCGAAGATA AACGTGAACA TTTATACGGT
GGTGACAAAA TCGCTGAGTA TCGCTTATCC CCAGATAAAA AATGGATTGC CTTCGTATAT
CAATATAAAG CGTACGTTGC ACCTTTCACC GAGATAGGCC AAAAACAAGA TATTGGCCCT
AAAAGTACCA CCATTCCTAT TAAGCAACTC TCGGATCGCG CAGGAGAATA TCTGACTTGG
CGCAGCGACA GCCAAGCGAT TAGTTGGTAT CACGCAGCGA CTTACTATGA GCGCGAGTTA
AAAGAAGCAT TTGCATTCGT ACCCGGCGCA GCCGAAGATT TACCTGACCC TGTTACTGAG
GGCATGTCAC TCTCATTTGA GCAGAAAACC GATAAGCCCT CAGGTTATAA AGCACTTGTG
GGCGGTACAG TTGTCACTAT GCGTGACGCC AATAACCAAC AAGAAATCAT TGAAGATGCT
GTGGTTGTTA TCAAGGACAA TAAGATTGTT GAAGTGGGCA AACGTGCAGA CATTACTATT
CCCAACAATG CTCTTAAAAT TGACACCACT GGCAAAACAA TTCTACCAGG CTTGATTGAT
GCTCACGCTC ATGGCTCACA AGGCAGTAAC GAGATTATCC CAGAGCAAAA CTGGAACATG
TACTCAGCTC TCGCCTTTGG TGTGACGACT ATCCATGACC CATCAAATGA CACCTCGGAA
ATTTTTGCTG CCAGCGAATT GCAAAAAGCT GGCAAACGCG TTGCCCCTCG CACCTACTCT
ACCGGTACCA TTATTTATGG TGCGGAAGCC CTAGGCTATA AGGCGATTAT TAATAGCTAT
GAGGATGCAC TGACTCACTT GCGTCGCCTT AAGGATGCCG GAGCGATTTC AGTTAAAAGT
TATAACCAAC CTCGCCGCGA CCAACGCCAG CAAATATTAG CCGCGGCCCG TGAATTAAAC
CTGATGGTGG TGCCAGAAGG TGGCGGTAAA TATCAGCAAA ATATCTCTAT GTTAGTAGAT
GGTCATACAG GACTCGAGCA TTCTCTTCCA ATAGCGAGAG GCTATCAAGA CTTGACGGCA
TTGTGGGTGG AAACTGAGTT TGGTTACACC CCAACGTTTG TAGTGTCCTA TGGCGGCCTA
ATGGGTGAAG AGTATTGGTA TGACCGCACA GAGGTATGGA AAAACGAAAG ACTTCTGCGC
TACACACCTA GCTTTCTGTT AGATAGGCGC GCTATTCGTC GCCCTACCGC CCCAGATAAT
CAATACAACC ACGTATTTGT TGCACAATAC GCTAAAACAT TACGTGATAA AGGCGTAAGC
GTACATATCG GCGCTCACGG GCAACGTGAA GGCTTAGCTG CGCACTGGGA GCTTTGGCTA
ATGACGCAAG GTGGTTTCAC ACCATGGGAA GCACTGCGAG GAGGCACTAT TGATGGCGCC
ACGCACCTAG GCATGGGCAA GCAACTAGGA AGTATTGAAG CAGGCAAGTT AGCGGATATG
ATGATTATCG ACGGCGACGT ATTAACGGAT ATTCGCCGCA GCGAATATGT AACTTATACC
GTAATCAACG GCCGTATATA TGATGCAGCG ACCATGAACG AAGTGGGCAG CAAAACCAAG
CGCCCTGCTT TCTTCTTTGA AAATAACAAT ACACTCTTTA TGCCTGAGGC AACACAACAG
AGTATTCAAC AAAAATCAGA GAAGCATCAC TGGGTTCACT AA
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| Protein sequence | MYKNLINVAL FSTMLSLSAD AFSRVELQKA KQNALTEESS EAEWDVLNPP FNLNEVTINT
DETTWSSLDV SPNGEKFVFD MLGDLYVSSI GGGEATSLTQ DFAWNIQPTF SPDGKKIAFI
SDRGGMSNVW VMNSDGSNLV QVTKEKNNLI HSPKWSPDGQ YIVANKGIMS SRSIPAGEIW
LYHHSGGDGM VLKKRVHGNP DQKNIADPAF SPDGKYLYYT QDVSPGSTFD YNRDPLKSIF
AITRYDMNTG EEERYISGTG GAVVPTPSPD GKQIAFIRRV KEKTGLFVKD IATGVESLLY
LKLERDMQEG FGSEGYFPYF DWMPNSKRIV FWTGGKFHSI DVKTQAVKDI PVSVKATVKY
ADAVRFDVDV APEKFAVKMA RWAQKSPNGQ NIVFQALGKL YIKEIKSGKV KRLTRQNDHD
EYYPRYSHDG KKIVFTTWND KDLGSVRTVS ASGRSEKVIS KEPGHFIEPS FSTDDKLITY
NKKTGGYLLA PEYSVEPGIY TATVKGEKHR RVAKNGSAPH FAGDNSRVYF TESVSGSDYP
EQQLVSVDLN GEDKREHLYG GDKIAEYRLS PDKKWIAFVY QYKAYVAPFT EIGQKQDIGP
KSTTIPIKQL SDRAGEYLTW RSDSQAISWY HAATYYEREL KEAFAFVPGA AEDLPDPVTE
GMSLSFEQKT DKPSGYKALV GGTVVTMRDA NNQQEIIEDA VVVIKDNKIV EVGKRADITI
PNNALKIDTT GKTILPGLID AHAHGSQGSN EIIPEQNWNM YSALAFGVTT IHDPSNDTSE
IFAASELQKA GKRVAPRTYS TGTIIYGAEA LGYKAIINSY EDALTHLRRL KDAGAISVKS
YNQPRRDQRQ QILAAARELN LMVVPEGGGK YQQNISMLVD GHTGLEHSLP IARGYQDLTA
LWVETEFGYT PTFVVSYGGL MGEEYWYDRT EVWKNERLLR YTPSFLLDRR AIRRPTAPDN
QYNHVFVAQY AKTLRDKGVS VHIGAHGQRE GLAAHWELWL MTQGGFTPWE ALRGGTIDGA
THLGMGKQLG SIEAGKLADM MIIDGDVLTD IRRSEYVTYT VINGRIYDAA TMNEVGSKTK
RPAFFFENNN TLFMPEATQQ SIQQKSEKHH WVH
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