| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0462 |
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| Symbol | |
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| ID | 4173235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 535225 |
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| End bp | 536103 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053465 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_660046 |
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| Protein GI | 109896791 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT CAAAAGTGAA TGCACTACGT TTTGCAATGG CAACACTAAC GTTATTTGGT
AGCACGACAT TAAGCGCTGA TGATGATAGG TTCGCCGATG TACACATTAG CACCCAAGCG
GTGAGTGGCT CAACATACAT GCTCACTGGT GCAGGAGGTA ATATCGGTGT GTCGGCTGGG
GATGACGGTA TTTTGATTAT TGACGATCAG TTCGCTCCCT TGGCTGACAA AATTGCGCTC
GCGATTGGCG ATATTGCCAA GCAGCCAATG AAATACGTAA TCAATACCCA TTATCATGGT
GATCACACAG GTTCCAACGC CTATTTTAAA GAAGTACAGG GAAGCACTAT TTTTGCTCAT
GATAATGTGC GTAAACGCTT AGCCGCCGAA GACGGTCATA AACACGCAGC CTTACCCGTT
GTGACCTATG AGCAGGGGCT GACGTTTCAC TTCAATGGCG ATACCATCAA GGTGCTACAT
CTTCCTGCAG GCCACACCGA TAGCGACAGT GTTGTTTGGT TTGAACAGGC GAATGTATTG
CACGCGGGAG ATTTATTCTT TCAGGGGCGT TTCCCTTACA TCGACTTGGC CGGTGGCGGC
ACGGTTAAAG GATACATTAG TAACGTTTCC ACCGTGATCG ACATGATAAA CAACGATACT
AAGGTCATGC CTGGACATGG TGAGTTAGCC GATAAGAAAG CTTATCAAGC GTCACTTGAG
ATGATGCAGC AAACCGCTAA CTATGTTTCG GATAGAAAAT CTAAAGGCGC TAGCCTAGAC
TCGCTTATCG AAGAAGGTCT TGATGATAAA TGGCAAGACT GGGCGTGGAA CTTCATCACT
GAAGAAAAGT GGATCACCAC ACTCTATAAC GGCCAATAG
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| Protein sequence | MFKSKVNALR FAMATLTLFG STTLSADDDR FADVHISTQA VSGSTYMLTG AGGNIGVSAG
DDGILIIDDQ FAPLADKIAL AIGDIAKQPM KYVINTHYHG DHTGSNAYFK EVQGSTIFAH
DNVRKRLAAE DGHKHAALPV VTYEQGLTFH FNGDTIKVLH LPAGHTDSDS VVWFEQANVL
HAGDLFFQGR FPYIDLAGGG TVKGYISNVS TVIDMINNDT KVMPGHGELA DKKAYQASLE
MMQQTANYVS DRKSKGASLD SLIEEGLDDK WQDWAWNFIT EEKWITTLYN GQ
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