| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0453 |
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| Symbol | |
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| ID | 4173226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 527790 |
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| End bp | 529001 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053456 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_660037 |
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| Protein GI | 109896782 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0193491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTAA AAGCATATTT AGAGAAAATT GAACCTAACT TTGAAGCAGG TGGTAAGTAC
GAAAAATGGT ATGCGCTTTA CGAAGCCGCA GCGACCATTT TTTACACCCC TGGTAAAGTT
AACAAAGCTG GCACTCACGT GCGTGACAGC ATCGACTTAA AACGTATTAT GATCATGGTA
TGGGCTGCTA CGTTCCCTGC AATGTTCTAC GGTATGTACA ACATAGGTCA GCAAGCTCAT
AACGTTATTC TAAACGGTGG CGCGTCATTG CCTGATATGT GGCAAGCGGC TTTATTTACT
GCGCTTGGCG GTCAAATAGG CCTTGAGTCT ACCGGTGGAT TAGCCATGTT CCTTTACGGA
GCGTGCTTCT TCCTACCTAT CTACGCCGTA ACCTTTATTG TGGGCGGCTT CTGGGAAGTA
CTGTTTGCTT CTGTGCGTAA GCATGAAGTT AACGAAGGCT TCTTTGTTAC CTCAGTACTT
TTCGCATTAA CCTTGCCTGC AACTATCCCT TTATGGCAGG TGGCGCTGGG TATTACCTTT
GGTGTGGTGA TTGCGAAAGA AGTCTTTGGT GGCACAGGCC GTAATTTCCT AAACCCTGCG
CTTTCTGGTC GTGCGTTCCT ATATTTTGCT TATCCTGCAC AAATTTCAGG CGATGCAATT
TGGACGGCTG CCGACGGTTT CTCAGGGGCG ACTTGGTTAA GCCAAGCGGC TGCTGGCAAT
GTTACCGATT GGTCTTTGAA TGCTGATTGG TGGGATGCAT TCTTCGGAAA TATTCAAGGT
TCTGTCGGTG AAGTATCGTC ACTGGCTATC TTGCTGGGTG GCTTGTTCAT TATTTATATG
CGTATTGCTT CATGGCGTAT CGTGTTAGGT GTGCTGCTAG GCGGGGCGGT ATTCAGTACT
TTGCTTAACG TTATTGGCAG TGACACAAAT GCTATGTTTG CTATGCCTTG GTACTGGCAC
GTAGTGACCG GTGGATTCGC TTTTGGTATG TTCTTTATGG CGACCGATCC TGTTTCAGCA
TCATTCACAA ATAGCGCTAA ATGGGCTTAC GGTTTCTTAA TCGGTTTAAT GTGTGTATTG
ATTCGTGTAC TCAACCCTGC TTTCCCTGAA GGTATGATGT TGGCAATCTT GTTTGCCAAT
TTATGGGCTC CACTATTCGA TTATTTCGTC GCTCAAAGCA ATATTAAACG GAGGATGGCA
CGTGTCGGCT AA
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| Protein sequence | MGLKAYLEKI EPNFEAGGKY EKWYALYEAA ATIFYTPGKV NKAGTHVRDS IDLKRIMIMV
WAATFPAMFY GMYNIGQQAH NVILNGGASL PDMWQAALFT ALGGQIGLES TGGLAMFLYG
ACFFLPIYAV TFIVGGFWEV LFASVRKHEV NEGFFVTSVL FALTLPATIP LWQVALGITF
GVVIAKEVFG GTGRNFLNPA LSGRAFLYFA YPAQISGDAI WTAADGFSGA TWLSQAAAGN
VTDWSLNADW WDAFFGNIQG SVGEVSSLAI LLGGLFIIYM RIASWRIVLG VLLGGAVFST
LLNVIGSDTN AMFAMPWYWH VVTGGFAFGM FFMATDPVSA SFTNSAKWAY GFLIGLMCVL
IRVLNPAFPE GMMLAILFAN LWAPLFDYFV AQSNIKRRMA RVG
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