| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0423 |
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| Symbol | |
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| ID | 4173812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 499547 |
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| End bp | 501946 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053426 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_660007 |
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| Protein GI | 109896752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.721204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAAC CGTTTGATGT GACACTGGAT AATTGTCATA AAGAGCCCAT CCATATCCCA
GGTTCGATTC AACCTCATGG CTATCTATTA CTGTTTGAGC CAGAAACACT GATATTACAG
TATTGCAGTG AAAACGTGGC GGACTTAATG CAATGCTCGC TAGACGCGTT ACTTGGGCAG
TCATTGGATT CAATATTTGA CCGCGAATTC GCCACAAAGG TAAAGGCGCT CGATTTCGAT
AAAGGCTTTC ACGAGGTTAA CCCACAGCAA ACGACACCGA TTGCCGCGCT CGCTCAAGCG
CTGAACTCTA ATACCACGGG GCCGGTGACT GACGCGCAAG CCGAGAGTAT CAAAACACAA
TCAACTTACA ATGCCATACT GAGCTTACAC GACGACCTAT TGGCCATTGA ATTAGAGCCC
GCGTTATCTG CTAGTTCAAG TTCGTTTAAT CCCGTTAAAA ATTTAATTAA TCTATCGCTT
AATGACTTGG CCCAAAGCCA AGACTTAAAT AACGTTTTTG CTTATTCAGT TAACGAAATT
CGCAAAGTTA CTGGGTTTGA TCGCGTCATG TTGTATAAGT TTGATGCGGA CTATAACGGT
GAAGTTGTTG CTGAGGCTAA AAAGCCTGAG TTGAACTCCT TTTTAAAACA GCACTTTCCT
GAGTCAGATA TACCAAAGCA GGCGAGGGAG CTGTACGTTA AAAACCCCAT TAGACTGCTT
GCTGATGTTA ACGCCAAGCA GTCTATGTTG TACCCAAATG ATCGGCCTGT TGACTTGAGT
AAGGTGACGC TGCGCAGTGT GTCACCTATT CATTGTCAGT ATTTACGTAA CATGGGGGTG
AATGCCTCTA TGTCGATCAG CATAGTGGTG TCGGGCAAGT TGTGGGGGCT AATTGCATGT
CATCACTATC GCTCTCATGT AGTGCCGTTT GAAACGCGTG AAGTGGCTTT ATACATGGGG
TTGATGTTGT CTTATTTGAT TTCATTAAAA GTACAAGCTG ATGCTGAGCA CCGTGATTCG
GCGGTGTTAT CGTTAAATGC GTCGATCACC GCAAAAATGG CTGAGCGTAT TTTCTTTACA
GATGGTTTGC GTGAAGAAAC AGACAATCTG ATGCGTATGA TGAACGCATC AGGCGTGGCC
TGGCGACTAG AAGAAGACAT AGAATGCTTT GGCAAAACCC CCAGCCCTGA TCGCATAGAA
GCGCTTTTTA ACTGGGCGAC ATCAACCAAG TTAGTCACAG ATACGATTTA CCATACAAAG
ACCTTAGGTA AAGATAACCC TGACTTTATG GATATCAGTG ACGTTGCCAG TGGCGTATTC
ATCTTGTCTG TCTCCTCTGT TAGTAACTTA TTCTTGATAT GGTTTAGGCA AGAGGTTGAA
CAAACCAAAG ATTGGGGAGG GAAACCTGAA AAAACGATCG AGTTTTTAGA TGATGGCAGC
CATAGGCTGA TGCCGCGAAG TTCTTTTCGT TTATGGCGTG AAAATGTCAA AAACCAATCG
TTAGCCTGGG AAGCGGTAGA GTTATCCAGC GCTTTGAAAT TCCGAGACAC GATAGTGAAC
TATGTGTTGT CAAAATCGGA GCGTCTTGAG TTACTAAACG AAGCGTTAGA GCACAAAGTA
GCTGTGCGTA CCGACGAACT AAAAAAAGAA ATTGCTAATA AAGAAAAAAT GCAAGATGAG
TTAGTGGAAG CCTTAGCCGC CTCTGAAGAA TCTAACCGTG AGCTAGAGCG TTTTGCATTT
GTTGCCTCAC ACGACCTTCA AGAGCCGCTT CGTAAAATTC AGTCGTTTGG TGGGCGTATT
CAGCAAACAG AGGCCACGTT AAGCGATAGA GGCCATGATT ATCTAACCAA GATGATGAAC
TCAGCAGAAA GAATGCAGGC GCTGATTAAA GGCGTGCTGA GCTTTTCACG TATCCACAGA
TCTAATGACG AGTTTGTTCC TTTGAATTTT GATGACATTA TTGAAGATGT GATCATGGAT
TTAGAAGTGT TGGTGACAGA GCAAAAGGCA GCTTTCTCAA TCGATCATAT TGGCACAGTG
TACGGAGATA AAAACCAGCT TCGCCGTGTG GCGCAAAATA TCATTCAGAA CGCCCTAAAA
TTCACTAAAG AGGACGTCCC TCCGCACATT GTTATTGCCC TTAACGATAA AGACGAAGAC
TTTGTCACCA TTGAATTTAA AGACAATGGC GTTGGATTTG CAAAAACGCA TGAGCAAAAA
ATATTTGGTT TGTTTGAGCG TTTACACTCA AAAGCTGAGT ATTCAGGGAC TGGTCTAGGC
TTAGCGATAT GCAAAAAAAT TATTAATCGA CATCAGGGGA AAATTTGGGC TGAGTCTCAA
TTTGGTCAAG GCGCGTCATT TTTTATTACG TTGCCAATAA GATCAGAAGC AGTAGAATAA
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| Protein sequence | MNKPFDVTLD NCHKEPIHIP GSIQPHGYLL LFEPETLILQ YCSENVADLM QCSLDALLGQ
SLDSIFDREF ATKVKALDFD KGFHEVNPQQ TTPIAALAQA LNSNTTGPVT DAQAESIKTQ
STYNAILSLH DDLLAIELEP ALSASSSSFN PVKNLINLSL NDLAQSQDLN NVFAYSVNEI
RKVTGFDRVM LYKFDADYNG EVVAEAKKPE LNSFLKQHFP ESDIPKQARE LYVKNPIRLL
ADVNAKQSML YPNDRPVDLS KVTLRSVSPI HCQYLRNMGV NASMSISIVV SGKLWGLIAC
HHYRSHVVPF ETREVALYMG LMLSYLISLK VQADAEHRDS AVLSLNASIT AKMAERIFFT
DGLREETDNL MRMMNASGVA WRLEEDIECF GKTPSPDRIE ALFNWATSTK LVTDTIYHTK
TLGKDNPDFM DISDVASGVF ILSVSSVSNL FLIWFRQEVE QTKDWGGKPE KTIEFLDDGS
HRLMPRSSFR LWRENVKNQS LAWEAVELSS ALKFRDTIVN YVLSKSERLE LLNEALEHKV
AVRTDELKKE IANKEKMQDE LVEALAASEE SNRELERFAF VASHDLQEPL RKIQSFGGRI
QQTEATLSDR GHDYLTKMMN SAERMQALIK GVLSFSRIHR SNDEFVPLNF DDIIEDVIMD
LEVLVTEQKA AFSIDHIGTV YGDKNQLRRV AQNIIQNALK FTKEDVPPHI VIALNDKDED
FVTIEFKDNG VGFAKTHEQK IFGLFERLHS KAEYSGTGLG LAICKKIINR HQGKIWAESQ
FGQGASFFIT LPIRSEAVE
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