Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0373 |
Symbol | |
ID | 4173966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 426068 |
End bp | 426940 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638053372 |
Product | heat shock protein HtpX |
Protein accession | YP_659958 |
Protein GI | 109896703 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGAA TACTAATGTT TTTAGCCACT AACATTGCCG TTATGGTATT GATTAGTTTG GTCTTTAGCC TGTTTGGTTT TCAAGGTTTG TTAGCACAAA ACGGGGTTGA TTTAGACTTG CAGGCTCTGC TTGTTTACTC GGCCGTTATT GGCTTTAGTG GCTCGATCAT CTCCTTGTTA ATCTCAAAGT TTATGGCCAA GCGCAGTATG AATGTGCATG TGCTTGAGCA TCCTGAAAAT GACACTGAAC GTTGGTTACT ACGCACGGTT GAGCGCCAAG CAGAACAAGC GAATATCGGC ATGCCTGAGG TGGGTATATT CGTGCACGCA AGCCCCAATG CCTTTGCCAC TGGGTGGAAC AAAAACAATG CATTAGTGGC AGTCAGTACC GGCTTACTTG AAAACATGAC CCAAAGCGAA GTTGAAGCTG TGCTAGCTCA CGAAATTAGC CATGTTGCCA ACGGCGATAT GGTAACCATG ACCCTAATCC AGGGCGTGCT GAATACCTTT GTGGTGTTTT TGTCGCGGGT TATCGGCCAT GTGGTAGACC GAGTCGTGTT TAAAGTCGAA CGGGGTCACG GGCCAGCGTT TTGGATAGTG TCGATTATCA GCCAAGTAAT ACTCGGCATC TTAGCATCGA TGATCGTAAT GTGGTTTTCA CGTTACCGTG AATTTAGAGC CGATGCTGGC GGTGCAAGTA TCGCGGGGCG CAACAATATG ATTGCTGCAC TTAAGCGTTT AAAGCAAAAC CAAGATGCGC CGCCCATGCC AGAGGAAATG GCTGCGTTTG CCATTAGTGC AGGCAAGGTG CAAAAGTTGT TTTCCAGCCA CCCTCCGCTG GACAAACGCA TAGAGGCACT GCAGAAAGGT TAG
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Protein sequence | MFRILMFLAT NIAVMVLISL VFSLFGFQGL LAQNGVDLDL QALLVYSAVI GFSGSIISLL ISKFMAKRSM NVHVLEHPEN DTERWLLRTV ERQAEQANIG MPEVGIFVHA SPNAFATGWN KNNALVAVST GLLENMTQSE VEAVLAHEIS HVANGDMVTM TLIQGVLNTF VVFLSRVIGH VVDRVVFKVE RGHGPAFWIV SIISQVILGI LASMIVMWFS RYREFRADAG GASIAGRNNM IAALKRLKQN QDAPPMPEEM AAFAISAGKV QKLFSSHPPL DKRIEALQKG
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