Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0320 |
Symbol | |
ID | 4173142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 372520 |
End bp | 374331 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638053319 |
Product | hypothetical protein |
Protein accession | YP_659906 |
Protein GI | 109896651 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA AAACAGTAAG AATTGGCGGT GCATCGGCCT TTTATGGCGA CAGTCAACTA TCGGCTCGCC AGCTGGTGGA CGATGGCAAT ATTGACTACT TGGTATTTGA TTATTTAGCC GAAGTCACTA TGGCTATTTT GTCTCAAGCC AAAGCCAAAA ACAGCGATTA CGGCTACGCC GTGGATTTCG TCACCGTGGC GATGAAAGAC GTGCTGGCCG ATTGCGCCCT AAAGGGCATA AAAGTGATCG CCAATGCCGG TGGTATGAAT GTACCGAGCT GCATAAGGGC ACTTGAGCAG TTATGCAGCG AGCTTGATAT CAGCTTGAAT ATTGCAGGGG TATACGGTGA TGACCTATCC GCCAATCGCC CCAATCTGAA TAGCGACGAC CTTGCAGAAA TGCAAACTGG GCAGCCTCTA CCCGAGCGCT TAGCCAGCAT GAACGCCTAT TTAGGTGCGC GCCCCATCGC TGACGCCTTA GCGGCTGGTG CAGATGTGGT GGTAACCGGG CGCGTAGTCG ACAGTGCCTT AGTGATAGGG CCGCTTATGC ACGAGTTTAA TTGGCAAGAA AACGATTACG ACAAACTGGC CCAAGGCGCA TTGGCGGGGC ATATTTTAGA GTGCGGCGCC CAATGCACCG GCGGTAACTT CACTGACTGG CATTTGGTGC CTGACTTTTC CAGCATGAGC TACCCTATTG CCCAAGTGAG CGCCAACGGG GCGTTCGAGG TAGGCATAGT GCCAAACACT GGTGGCATGG TGACTGAGGC CACGATTGGC GAGCAGGTTT TGTATGAAAT AGGCGACCCA GCGAACTATT TATTGCCAGA TGTCGCCTGT GACTTTAGCA ATATCACCCT GACCCAAACA GGCAAAGATA GGGTCAGCGT TTCAGGAGCA AAGGGGCGAG CGCCGGGTAA TCAGTATAAG GTGTGCGCTA CCTACGTTGA TGGCTACAAG TTGATAAGCT CTTTCTTTAT GGGGGGCGAG CGAGCAGCAG ACAAAGCCAG AGTCAATATA AATGCCCTTG TGAAGCGCAC CGAGCGAGCC TTTGCTGCAA AAGGGTTAAG CGGTTATCGG CGCACCAGTA TCGAAATTAT GGGTGCAGAA GATACCTACG GCCCCCACGC AAAAGCCCAA AATACTCGGG AGGTCATTGC CAAGTTTGGT TTGCATCACG ATAACAAGGT GGCATTGCAC TTTGCCGCCA GTGAAATTGC CTATTTAGCC ACCTCAGCAG CGCCGGGCAT GAGTGGTTTT GGGGCTGGGC GGCCCAAACC GCAACCATTG ATTCGCGTAC ATTCAACGCT GATTGATAAG TCAGACGTAC CGGTTACGGT GCAATTAAAC AAAACCGTGC TTTTCACCCA ATGCTACCTG ACTCCTGAGT CATCTGCCTC TATCGAGGCT GCGCAATTTT CGCCAGATGC TATTAAAGCT GACGTTACAA GCTCTGATGC TGCAAGCAGT GAGTCGCTAA CTAGCGTGCC GCTGGTTAAA TTGGCTTATG CCCGTAGCGG CGATAAAGGC GATAACGTCA ATATTGGGCT TATGGCGCGA GAGGCGAAAT TCTTACCTGT GCTCTACCAA CAAGTGACTG AGCAGGCTGT CGCGATCTAC TTTGCCCATC AAATTGAAGG GCACGTCTTG CGCTATAACG TGCCAGGCAT AAACGGGTTT AACTTCTTTA TGACCCAAGC GCTGGGCGGT GGCGGCACCG CGTCACTCAG AACCGATACC CAAGGCAAGG CAGCCGCGCA AATGTTGTTG TCGATGCCGG TTAGGGTGCC AAAAAGCTGG GAAGACATGT GA
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Protein sequence | MSNKTVRIGG ASAFYGDSQL SARQLVDDGN IDYLVFDYLA EVTMAILSQA KAKNSDYGYA VDFVTVAMKD VLADCALKGI KVIANAGGMN VPSCIRALEQ LCSELDISLN IAGVYGDDLS ANRPNLNSDD LAEMQTGQPL PERLASMNAY LGARPIADAL AAGADVVVTG RVVDSALVIG PLMHEFNWQE NDYDKLAQGA LAGHILECGA QCTGGNFTDW HLVPDFSSMS YPIAQVSANG AFEVGIVPNT GGMVTEATIG EQVLYEIGDP ANYLLPDVAC DFSNITLTQT GKDRVSVSGA KGRAPGNQYK VCATYVDGYK LISSFFMGGE RAADKARVNI NALVKRTERA FAAKGLSGYR RTSIEIMGAE DTYGPHAKAQ NTREVIAKFG LHHDNKVALH FAASEIAYLA TSAAPGMSGF GAGRPKPQPL IRVHSTLIDK SDVPVTVQLN KTVLFTQCYL TPESSASIEA AQFSPDAIKA DVTSSDAASS ESLTSVPLVK LAYARSGDKG DNVNIGLMAR EAKFLPVLYQ QVTEQAVAIY FAHQIEGHVL RYNVPGINGF NFFMTQALGG GGTASLRTDT QGKAAAQMLL SMPVRVPKSW EDM
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