Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0319 |
Symbol | |
ID | 4172913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 370438 |
End bp | 372507 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638053318 |
Product | carbamoyl-phosphate synthase L chain, ATP-binding |
Protein accession | YP_659905 |
Protein GI | 109896650 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTG AGCAAATGAT AAACATTCAA AATAGCGATA CACAAGCTGG TGCAACCCAA TCCCATGGGC TTAAAAAGCA AAATCAGTTT CACAAAATAC TGATCGCCAA TCGCGGCGAA ATTGCCTTGA GGGTTATTCG CACGGCTCGC CAAATGGGGT ATCGCACCGT GGCTGTGTAT AGCGAGGCAG ACAAAGACGC TGCTCATGTA CTCGCCGCCG ATCAAGCGGT GTGTGTTGGC CCTGCCAGTG TGTCCGAGTC GTATCTGATG ATCGACAACA TTATTGCGGC AGCGCACAAA ACCCAAGCCG ATGCTATTCA CCCTGGTTAT GGTTTTTTAT CTGAAAACCC AGCGTTTGCA CGGGCCTGTG ATGCCGCGGG GATTCAGTTT ATCGGCCCTG ATGCCTCGGC CATTGAATTG ATGGGCAGCA AGCGGCTATC AAAGGTAGCC ATGTTAGACG CCGGCGTGCC GTGTATTCCT GGCTATCAAG GTGCAGAACA AAGCGACCAA GTGCTGGTTA AAAAGGCAGC AGATGTGGGC TTTCCTATCA TGGTTAAAGC CTCTGCTGGT GGTGGCGGGC GCGGTATGCG TTTGGTCACT GAGCAAGGTG AGTTAGCGGC GCAGATAAAA ACCGCACGCT CTGAAGCACT TAGCGCGTTC GGTAGCGGTG AATTAATTCT TGAACGCGCG GTTTTGGCCC CTCGGCATAT CGAAATTCAA ATATTTGCTG ATAGTCACGG CAATACCGTT TATTTAGGTG AACGTGACTG TTCGATACAG CGTCGTCATC AAAAAGTGGT TGAAGAAGCG CCATCGCCCT TTGTTGATGA AGAATTACGG GAACGCATGG GGCAAGCGGC TGTGAGTGCA GCCAAAGCGT GCGGCTATCA AGGCGCAGGC ACGGTAGAGT TCTTGGTTGA TAGTGACAAA AACTTCTACT TTTTAGAAAT GAATACTCGC TTACAAGTGG AGCATCCGGT GACTGAACTT ATCACAGGAC TGGACTTAGT GGAGTGGCAA CTGCGGGTAG CTGCGGGTGA AGCGCTGCCG CTAACGCAAC AAGAGGTTAA CTTCAACGGA CACGCCATAG AAGTGCGGTT ATACGCGGAA GACCCTCGGC AACGCTTTAT GCCCCAAACG GGCAATATTC TTGTATGGCA ATACCCTGAA CGCGAAGGCA TTCGTGTCGA TCACGGCATC AATACCGGTG ATACCGTCAG TGCTCATTAC GATCCCATGT TGGCGAAAGT CATCGCCTAT GGGCCAGACC GGGCAACCGC CGCACGGCGA CTCGCCAGTG GCATTGAAGA CATTCAGCTA GTGGGCGTGA ACACCAACAA AGCTTTCTTG CTTAATGTAC TGCGCCACCC CGCATTTATA AACGCCGAGA CGACAACAGC CTTTATTGAG CAACATTTTA CCGAGCATGC CAGTACCCAA AATACGGCTC CCGCGATAGG CACGCTAGCC AGAGCCGCCA TGATTTACTT TCAGCACCCT TTATTTGGTC AGCACGCTTC ATTTGACCAG CCTACTTGGA GCAGTGCAGC ACCTCAGGTG TATCACTTCA CCCTGAAAAT CAATGAGCAC ATCTATGCAG TGCAAATACA CAAACAGGCG GACCGATACT TAGTTAAAAG TGAGACCCAA GAGACCGAAC TTACCTTAGT AAGTCATGGG GCGAATCAAG CGGTGGTGAT TGAAGAGGAC ATTCGCCAAG GTTTTAGCTA TGCGCAGCAA GACACAACAC TCTTTTTAGA TGATGGCAGC GGCCATTACC GAATCGACGA TATCACCCAG CAGCCAGCAA ATGTGAGTGA GCAAAACGCA AGTGGCGAAA TCAACGCTGT CATGGACGGA GTGATAATCG ACGTATTAGT AAAAGAGGGA GATGCCGTTG AAACCGGGCA ACTTATGGTC GTCATGGAAG CCATGAAAAT GGAGCATCAG TTAAAGGCGC TGAGCACGGG GCGCGTCACT GAGGTGCGCG CAACAACGGG CCAGCAGGTG AAATCTAAAC AGCTATTGGT CAGTATCAGT AGCAACGACG ATACGCACAG CGATGCGTAA
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Protein sequence | MSTEQMINIQ NSDTQAGATQ SHGLKKQNQF HKILIANRGE IALRVIRTAR QMGYRTVAVY SEADKDAAHV LAADQAVCVG PASVSESYLM IDNIIAAAHK TQADAIHPGY GFLSENPAFA RACDAAGIQF IGPDASAIEL MGSKRLSKVA MLDAGVPCIP GYQGAEQSDQ VLVKKAADVG FPIMVKASAG GGGRGMRLVT EQGELAAQIK TARSEALSAF GSGELILERA VLAPRHIEIQ IFADSHGNTV YLGERDCSIQ RRHQKVVEEA PSPFVDEELR ERMGQAAVSA AKACGYQGAG TVEFLVDSDK NFYFLEMNTR LQVEHPVTEL ITGLDLVEWQ LRVAAGEALP LTQQEVNFNG HAIEVRLYAE DPRQRFMPQT GNILVWQYPE REGIRVDHGI NTGDTVSAHY DPMLAKVIAY GPDRATAARR LASGIEDIQL VGVNTNKAFL LNVLRHPAFI NAETTTAFIE QHFTEHASTQ NTAPAIGTLA RAAMIYFQHP LFGQHASFDQ PTWSSAAPQV YHFTLKINEH IYAVQIHKQA DRYLVKSETQ ETELTLVSHG ANQAVVIEED IRQGFSYAQQ DTTLFLDDGS GHYRIDDITQ QPANVSEQNA SGEINAVMDG VIIDVLVKEG DAVETGQLMV VMEAMKMEHQ LKALSTGRVT EVRATTGQQV KSKQLLVSIS SNDDTHSDA
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