| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0314 |
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| Symbol | |
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| ID | 4172908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 364502 |
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| End bp | 365470 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053313 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_659900 |
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| Protein GI | 109896645 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGC ACGTGACATT GTTTGCCAGC GAAAATGCAA TGGGACTCAG CTTAGGCCTG
ACTCATGATG TGTTAGCGTT TGCATCTACC TTGCAGCAGC GCTTACTCGG TCAGGCGATT
GAGATATCTT TGGTAACCGT AGATGGCAAG CCCACGTCTA CATTCAGTGG ATTGGCCATT
ACACCTGACT GCGCATTGGA TGAAGTTCAA GACACAGATT TGATTATTCT GCACAGTATA
TGGGGAGAGG TCGACACGCT ACTGAGTAAA CAAGCAGCGC TTTACCCTAG GCTTCGCACT
TGGCACGAGC AAGGCAAACC TATAATGGCG GCAGCCACCG GCGCTTACTT TTTAGCAGAA
GCAGGGTTAT TGAACGATCG AATAAGTACC ACCCACTGGC ATAAGCAAGC AGACTTCGCT
AAGCGATATC CCAAAGTTGA TGTCAGAGCC GAACGCTTCA TCACAGCCAC GGGAGAGCTC
TACTGTTCAG CAGGCATGAA TGCAGGACTT GAAATACTGG TTTACTTGAT TTCTAAACTC
TCATCGTCGT TGGTGGGTGA GGCAGTAGAG CACGCATTTC TTGTAGACTT TCGAACCGGT
TATGCTGGCG AATTCACCTC AATCAGCCAT CAAACTTATC ATCAAGACGA TGAAATACTG
TCGATTCAGC AATGGCTAGA AATGCACTTC ATGAGCTCAA TTTTGATTGA GCAATTAGCA
AGTAAAGTGA ATATGAGCCC CAGAACGTTT AAACGGCGGT TCAAAGAAGC CACAGGTGAA
ACGCCGCTGG GTTATATTCA GCAATTGCGC ATTGAGCAAG GCAAAGAGCA CCTTAAACAT
AGCGATAAAA GCATCGAAGA GATTTCATGG GCCGTCGGCT ATCAAGATGC AGGACACTTC
AACCGCTTGT TTAAACGAAA ATATCGTAAG AATGCTTCCG CCTGGCGTCA ACAATACCGC
TCTTATTGA
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| Protein sequence | MLKHVTLFAS ENAMGLSLGL THDVLAFAST LQQRLLGQAI EISLVTVDGK PTSTFSGLAI
TPDCALDEVQ DTDLIILHSI WGEVDTLLSK QAALYPRLRT WHEQGKPIMA AATGAYFLAE
AGLLNDRIST THWHKQADFA KRYPKVDVRA ERFITATGEL YCSAGMNAGL EILVYLISKL
SSSLVGEAVE HAFLVDFRTG YAGEFTSISH QTYHQDDEIL SIQQWLEMHF MSSILIEQLA
SKVNMSPRTF KRRFKEATGE TPLGYIQQLR IEQGKEHLKH SDKSIEEISW AVGYQDAGHF
NRLFKRKYRK NASAWRQQYR SY
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