| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0313 |
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| Symbol | |
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| ID | 4172907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 362950 |
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| End bp | 364440 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053312 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_659899 |
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| Protein GI | 109896644 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0564279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT CAAAAGTAGA TCCTCAAAAA AAACTAGTAA ACACCCCGTC TCTCAGTAAA
CGGTCGCTCT CTGCCCATGC TTGGTTGGGG CTATTTGTTA GCGCGTTTAT GTACATAATT
TGTTTATCCG GTACTTTAGC AGTGTTCCAT CAAGAGCTTG AGCGCTGGGA GCAACCGCAA
ATCCCTGAAA CAGGCAAGGT TGATATTGCC GTCATCGAAA AAGCGTATGA CAATTTTGTT
GAAACCTACC CCGAAGAAAC TGAGCACATG TATGTGGTCT TTCCAGGTTC GGGTATCCCA
AGGGTGGTGG TCGAGAACGA CCATATCGCG CATTTCGTTA ATCCTGATGG CTCATTAGGT
GAAGTAGAGC AGTCTCACTG GACTAAAATG CTGGTAGATT TGCACTTGTA TCTGCATCTA
CCCAAAAGCT TCGGCATGAT CCTCGTTAGT GCGTTTGGTG CACTGTTGTG TGCGCTAATT
TTGTCTGGCT TTCTTGCCCA TCCTCGTATC ATTAAAGACG CCTTTCGCTT TCGCCGCGGC
GGCACTGGGC TGCAAGAAAA CATTGATTTG CATAATCGCT TCAGTGTGTG GGCAGCGCCT
TTTCACATAA TGATTGGCGT AACAGGTGCC TATTTCGGCT TGGCCACTGT GTTGATTGGG
CTGGTGTCGC AAGCATTTTA TGCAGGGGAT AATCAGGCGG TTTTGGATGA GTTGTTCACC
CCTGAGCCAG CTTTAGAGCA ACCCTTACAA AGACCACAGA TAGGCCGCGC CATGGAGTAT
ATTGAGCAGC ATAATCCTGA AGGTACGCCG TTATTTCTTA CCATTCACGA GCCAAATACG
CCGGGACAAT TTATCGAAGC GTACGTGAAA CAACCTGGTC GGTTGATTTA CTCTGAGAAT
TATCGTTTTG ATATTCAGGG TAATTTCTTA GAAACCGCCG GATACCGTGA TGGTGGTCTT
GCCAAACAAA TTATCTTTTC AATGTATCGC CTGCATTTTG GTGAATTTGC TGGCATCGCA
AGCAAGTTAT TGTATTTTGT ACTCGGTATG ATGTTAACCG TGGTATCGGC CACGGGTATC
AATATTTGGC TGAGAAAACG CAAAACTACC GATGTGATTA ACCTGTGGTG GCCAACACTG
GTGTGGGGCA CACCGCTGAT ACTTAGCGTG AGCGCGCTGC TCAATTTGTT TGTGCACGTG
CGAATCGACC TCTTCATTTG GCTCGGCTTG GTCGCTGCCC TCGTAGTAGC GACGCGCCAG
CAAAACGTGC AGCTATGGGT CGCTAGGCTC AAACATGCAC TGGCGTTCTC ACTGCTCATA
TTCATCGCAG CTTACACAGC CAAGGCTGGC GCTGCAGCCT TTACCATTGC AGCCTTGCAA
ATCAATATTC CGCTTGCCCT GTACGCTGCG TATTTGTTGG CGAGAGGGCA CCGGCAGATA
ACTCTGGCAG GAAATGAAGA CCGTCAGGTG AGTCAGCCTG AATCGACGTA G
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| Protein sequence | MKNSKVDPQK KLVNTPSLSK RSLSAHAWLG LFVSAFMYII CLSGTLAVFH QELERWEQPQ
IPETGKVDIA VIEKAYDNFV ETYPEETEHM YVVFPGSGIP RVVVENDHIA HFVNPDGSLG
EVEQSHWTKM LVDLHLYLHL PKSFGMILVS AFGALLCALI LSGFLAHPRI IKDAFRFRRG
GTGLQENIDL HNRFSVWAAP FHIMIGVTGA YFGLATVLIG LVSQAFYAGD NQAVLDELFT
PEPALEQPLQ RPQIGRAMEY IEQHNPEGTP LFLTIHEPNT PGQFIEAYVK QPGRLIYSEN
YRFDIQGNFL ETAGYRDGGL AKQIIFSMYR LHFGEFAGIA SKLLYFVLGM MLTVVSATGI
NIWLRKRKTT DVINLWWPTL VWGTPLILSV SALLNLFVHV RIDLFIWLGL VAALVVATRQ
QNVQLWVARL KHALAFSLLI FIAAYTAKAG AAAFTIAALQ INIPLALYAA YLLARGHRQI
TLAGNEDRQV SQPEST
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