Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0300 |
Symbol | |
ID | 4172894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 350413 |
End bp | 351114 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053299 |
Product | hypothetical protein |
Protein accession | YP_659886 |
Protein GI | 109896631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.800671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCG CTACTCCACT GCACGACCAA GAACACGTCA CTGCTGGGCA ACGCACTAAC GCCTTAATGT CTGAAATGAC TCACTCGCAC AGTGACGAGT TCACTGTTCT GACCGATATT TACCAAGACA CGCACAATTT GGTTGTGTGG CAGCGTTCAC TTAGCGAAGA ATTGCTCGCT CATGTAGCAC ATTGCATAGA GGAAAATCCG CGCCTGAATC TCGAGAAGAG CATTCGTGCT AACGCTATTA TCGAAGATAT CAACGAGTTA TTAACTCCAC GTGGCTTCAA CGATGAGTTT ACTGACAACA TCGCGTCATT GGTGGATATG TTCTGCTGTT TGTTTGACTT AAAGCGGGTT GGATTGCGTC TAAAAGTGTT GGAACAAGCC ATGTGTCCTC GCTTCCATGT GGATTGGGTG CCGTGTCGGT TAGTCACCAC CTTTAGTGGC ACAGGTACCC AGTGGCTCCC CCACGATAAG GTTGATCGCA CTAAATTAGG CACGGGTAAT AACGGCATGC CAGATGATCA ATCAGGTTTG TATGCTGAGC CAAACGCGAT TCAAGCGCTG GCAGTAGGCG ACGTGGCACT GCTTAAGGGG GAAGGCTGGG AAGGAAATGA AGGCGCAGGC CTAGTGCATC GCTCACCACC TAATGAAGCG AATGAGAAGC GCCTATTATT GACCTTGGAC TTTATTTCAT AA
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Protein sequence | MSIATPLHDQ EHVTAGQRTN ALMSEMTHSH SDEFTVLTDI YQDTHNLVVW QRSLSEELLA HVAHCIEENP RLNLEKSIRA NAIIEDINEL LTPRGFNDEF TDNIASLVDM FCCLFDLKRV GLRLKVLEQA MCPRFHVDWV PCRLVTTFSG TGTQWLPHDK VDRTKLGTGN NGMPDDQSGL YAEPNAIQAL AVGDVALLKG EGWEGNEGAG LVHRSPPNEA NEKRLLLTLD FIS
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