Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0213 |
Symbol | |
ID | 4171759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 256999 |
End bp | 257700 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053212 |
Product | hypothetical protein |
Protein accession | YP_659799 |
Protein GI | 109896544 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCCT CAACACATCG ATTTTACGAA GATGTACTGG CCATCTTAAG CGGTACGGTC TTCGTTAGCT TAGGTTTAGC CATCTTTAAA GCGTTAGGTT TATTGATTGG TGGTACGGCA GGTATTGCGC TACTGCTGAG CCAATTTGTG CCGGTTAATT TTGGTTTACT GTTTTTTCTT GTGAACTTGC CGTTTTATTA CATTGCGCTG AAACAGTTAG GCTGGCGCTT TACCTTGAAT ACCTTTGTGA CCATTTCACT GGTGTCTTTG CTGGTGGAAA ACATGCACTT GTTTATATCC TTGAGTGACA TTCAGCCGGT TTTTGGTGCC GTTGTGGGGG GAATGCTAAT TGGTATGGGC ATGCTGATTT TATTCCGGCA CAAATCCAGT TTAGGCGGCT TGGGTATCTT AGCGTTTTAT TTACAAGGCA GTAGAGGCAT TCGCGCTGGC ACGTTTCAAC TGGTGGTAGA TAGCCTGATT GTGGTCGGGG CGTTATTCAT TATGAACCCG ATTTTATTGG CCATTTCATT GGCAGGTATG GTGACGACCA ACGTAATACT TGCGGTGAAT CATAAACCCG GGCGTTATCA CAGTAACTAT GCAGAGACCA TGGCCGAGTT AACCTCAGAA CCGGCTCAGG AAGCTAAAAC TATCCAACAA ATCAACACTG CTAAGGTTTC TGATCAACCG GCGAACAGCT GA
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Protein sequence | MHSSTHRFYE DVLAILSGTV FVSLGLAIFK ALGLLIGGTA GIALLLSQFV PVNFGLLFFL VNLPFYYIAL KQLGWRFTLN TFVTISLVSL LVENMHLFIS LSDIQPVFGA VVGGMLIGMG MLILFRHKSS LGGLGILAFY LQGSRGIRAG TFQLVVDSLI VVGALFIMNP ILLAISLAGM VTTNVILAVN HKPGRYHSNY AETMAELTSE PAQEAKTIQQ INTAKVSDQP ANS
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