| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0211 |
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| Symbol | |
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| ID | 4171757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 254179 |
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| End bp | 255201 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053210 |
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| Product | patatin |
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| Protein accession | YP_659797 |
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| Protein GI | 109896542 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.5257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAGC TGATACTTTC ACTGGATGGC GGCGGTATTC GCGGCGCAGC CACAACGCAA
TTTTTAACCC ATGTCGAAAA AGCCCTTCAA GAAAAACATC AAAAATCCCT ACGAGATTGC
GTGGATTTTT ATGCGGGTAC CAGTACGGGA AGCCTTATTG CTTTAGCACT CGCCACCACC
GACATGGACA TACAAGATAT TAATAAGCTG TATAGCTACA CGAATGCGAA AAAAATCTTT
GTCGAAAACC GCGGTGCATT TGAATTAGAC GGCATCAACG CGCCTAAATA TGAAGCCAAG
GGTAAAACTG ACATTCTTAA AAAGTCCCTC GGTCAGGCAA AAATAAAAGA TGTGCCCGAG
GGGAAGCATA TACTTGCTAT AACCTATGGT GTCGAGAAAC ATCGCCCGCA CGTGATTAAA
TCAACCCGTA GCGAATTTCA AAACTTACTT TCGTATCAAG TGGCTGATGC TTCAAGCGCA
GGGCCAACCT ATTTTCCCAC CCAAGTCATG AACCTCCCCC CGGATAACGA ACAAACATGG
TTAATTGATG GCGGCGTAGT AGCAAACAAC CCAACCATGT GTGCTATTGC CGAAGCATGC
CGGTTATGGC CAGATGCCAA TAGACGCGTG CTGTCGATAG GTACCGGTAC CCAAACACGC
AAAATTAATG GACCTGATTC GCGTAATTGG GGAGCACTAC AATGGATGCT AAAAGGCTGC
ATTATTGATG TGTTATCAGA TGAAAAAGTC GTCGCCTATC AGGCAATAAC TATCACTCCA
CCTGGAAGTT ATATCCGCGT TAACGCTGAA ATGCGCACTC AACCCGGTTT AGCCAAAGCC
CCCGATGATG CCATGGATGA CATTAGCCAA ACCAATATTA AGCGCTTAAA AGGCATGGGG
GATTTTTGGT ATAGCCAGTA TGGTGAAGCC GTGGTCGAGC TGCTTAACAA TAGTTATGAC
GGGCCCTCCC TCGACAGGAT TGATGCAAAT ACGGGGCAGC CCATTCAATA CAAACCAGGG
TGA
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| Protein sequence | MSKLILSLDG GGIRGAATTQ FLTHVEKALQ EKHQKSLRDC VDFYAGTSTG SLIALALATT
DMDIQDINKL YSYTNAKKIF VENRGAFELD GINAPKYEAK GKTDILKKSL GQAKIKDVPE
GKHILAITYG VEKHRPHVIK STRSEFQNLL SYQVADASSA GPTYFPTQVM NLPPDNEQTW
LIDGGVVANN PTMCAIAEAC RLWPDANRRV LSIGTGTQTR KINGPDSRNW GALQWMLKGC
IIDVLSDEKV VAYQAITITP PGSYIRVNAE MRTQPGLAKA PDDAMDDISQ TNIKRLKGMG
DFWYSQYGEA VVELLNNSYD GPSLDRIDAN TGQPIQYKPG
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