| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0198 |
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| Symbol | |
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| ID | 4171744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 235660 |
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| End bp | 236616 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053197 |
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| Product | band 7 protein |
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| Protein accession | YP_659784 |
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| Protein GI | 109896529 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTC TACTCAGTTA TTTACTCTCA GTGCAAACAT TGCTTTTAGT GTTTGTGATC
GTGCTGCTCA AGTCTTCTAT CAAATTTGTA CCGCAAAACC GCGCTTACGT GATCGAACGT
TTTGGTAAAT ATCAATCTAC CAAGGAAGCA GGCCTAAATT TTATTGTGCC CTTCATCGAC
CAAGTGGCTG CAGATCGTTC ACTCAAAGAA AAAGCCGTAG ATGTACCCGA GCAAAGCGCG
ATCACTAAAG ATAATATTTC CCTGTCGGTA GACGGCGTAT TGTATTTTCG AGTGCTTGAC
CCGTATAAAG CCACGTACGG TATTGATGAC TATGTGTTTG CGGTAACGCA ATTGGCGCAA
ACCACCATGC GTTCTGAGCT GGGTAAAATG GAGCTAGATA AAACCTTTGA AGAGCGCGAC
ATCCTAAACA CCAATATTGT TGCGTCTATC AATGAAGCAT CAGGCCCTTG GGGCATTCAA
GTGCTGCGCT ATGAAATTAA AGATATTGTG CCGCCGCTAT CCGTTATGGA AGCCATGGAA
GCCCAGATGA AAGCGGAGCG AGTAAAACGC GCCCAGATAC TCGAATCAGA AGGTGACAGG
CAAGCTGCCA TCAATCGCGC TGAAGGTGAA AAGGCCTCAG TAGTACTCGC CGCCGAAGCG
GATAAATCAG AAGCCGTATT GCGCGCTGAA GGTGAAGCAA AAGCGATTGT TGCGGTTGCT
GCAGCGCAGG CTGAGGCGCT ACGCCAAGTC GGTGAGGCCG CTGCAACGGA AGAAGGCCAA
AAAGCCATTC AGCTGGACTT AGCCACGAAA GCCATTGAGG CCAAAGAGGC AATTGCCAAA
GAATCATCCG TGGTGTTACT GCCAGATAGC GGCACTGATA TCGCAGGCGT TGTGGCACAA
GCCACCACCA TTATTAACTC ACTAAATCGA GCAAAACATG ATGTGGCTAA GCGATAA
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| Protein sequence | MDVLLSYLLS VQTLLLVFVI VLLKSSIKFV PQNRAYVIER FGKYQSTKEA GLNFIVPFID
QVAADRSLKE KAVDVPEQSA ITKDNISLSV DGVLYFRVLD PYKATYGIDD YVFAVTQLAQ
TTMRSELGKM ELDKTFEERD ILNTNIVASI NEASGPWGIQ VLRYEIKDIV PPLSVMEAME
AQMKAERVKR AQILESEGDR QAAINRAEGE KASVVLAAEA DKSEAVLRAE GEAKAIVAVA
AAQAEALRQV GEAAATEEGQ KAIQLDLATK AIEAKEAIAK ESSVVLLPDS GTDIAGVVAQ
ATTIINSLNR AKHDVAKR
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