Gene Patl_0194 details

Gene Information

• Locus tag: Patl_0194
• ID: 4171740
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 231294
• End bp: 233210
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638053193
• Product: peptidase S9, prolyl oligopeptidase active site region
• Protein accession: YP_659780
• Protein GI: 109896525
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATGC TTTTTTTCAT CACTTTGTTG TTTGCTCAAT CATTACTAAG CAAAGAGTGG 
CCATACCCCC AAGATACCCC CCAAACTAAA CCTATCAACA TAGGTACAGC CAGCGATAGA 
CCGTACGATA TTTCACGCTT AATCCTGGCG CGAGGGCCAT ATAACGCCTC TCTTAATCCC 
CAAGGTACGA TTGCCGCATA TATGAGTGAT GTTAGTGGTG CTCCGCAACT TTGGTTAATC 
CACATAAAAG ATAAAAAAGT GACTCAATTA ACCTTCGGTA ATGGCATTAC ACATTATCTA 
TGGCACCCCA ATGGCAAAGA GCTCATTTAT GGTGCAGACA ACAACGGTGA TGAGCGAGAA 
GCTTTCAATT TGATATCTAT TGACGGCCTG CATGAAAAAA TTGTGCTTCC CTTTACTGAC 
GCCTACCGAG TTCCTGGGTG GTTTGATACC AGCGGGCGTC ACTTTGCGTA TTCATCAACT 
GAGCGCAACG GCCGAGACTT TGATATTTAT GTTGTCGATT TTAATGCCCA GAGCAATAAG 
CTAACACCCC GTCTCATGTA TCAAGCGGAG TATTTCTTTA GACCTCATCA ATGGCAGCCG 
AACGGCGAAC ATCTTATTGT CACAGAAGCC GTAGGTGAAG ACGGGGCGAA TGTATATTTG 
CTTAACAACA GTAATGGCAA AATGTCCTCC GTATTCAAAC CTCAGATACC TTCAAGTTAT 
GGCAATTTTG TTTGGTCAGC CTCAGGTGAA TCATTTTATT TTACGTCAAA TGAAGGACAA 
GAGATGAATG CGTTACGCCA GTACGACTTG AGCTCTGCTA CTGAGCGCAC TTTATTTAGT 
GGTGATTACG ATATTGAAAA TGTACAGGTT TGTAAGCAAG GCACGTATTT GGTGTGGACA 
ACGAATGAGA ATGGCTTTGA CAAGCTGCAT ATTTACCATT TACAACGTGA TAACCAACAA 
CAAATACCCT TACCCCAAGG GGTATACTCC CTTTCTTGCG CTGAACAAGG TAAAGATTTA 
TTAGTCCGTA TAACCGGCCC CGCTACGCCG GGGAGTCTGT ATTTGGTAGA TTTAACCAAT 
CAGCAAACTG AACTGTTACT CGCACCTAAC ATGGCGGGTG TCGATAATGC AGAGATGTTA 
TCTCCCATTG CAGTCAGTAT GCCAGCACGG GACGGCGTAA CCATTTTCGG ATTATTATAC 
TTACCAATAA GCAAACAAGA CACCTCGCCT CCCATAATCT TCAACGTGCA TGGCGGGCCA 
GCTTCACAAT CTCGCGCCAG TTGGAAACCA GCTATCCAGT ACTTACTCGG CAAAGGCGTA 
GCAGTACTCG ATATAAACGT GCGAGGCTCG ACTGGATTTG GAAAAACTTA TGCTCAATTG 
GATAACCAAG AAAAGCGCTT AGATAGCGTA CGTGATTTAG TGGATGCCTT GGCTTGGTTT 
AAAAAAGAAG GAACAGTCAA CGTAGATCGC TCCGCGGTTA TGGGTCGCTC GTACGGTGGT 
TACATGGTTA ATGCCGTAAT GGGGGCGTAT CCTGATGCCT TCTCTGCGGG TATATCCATC 
GTTGGTGTCG CTGATTGGGT CACCGCATTG AAAACTGCAT CACCTGCGTT GAAAGCCTCA 
GACAGGATTG AATATGGTGA TATAAACGAG ACACGTTGGC AGAAGTTTTA TGCAGAAAAC 
TCACCCATTA ATACGGTGCA TAAAATCAAC GCACCGATGT TTTACGAGCA TGGTGTTAAT 
GACCCAAGAG ATCCTGTTGC GGAATCAGAC ATTATGGTAA AAACGTTGAG AGAAAAGGGG 
TTGCCCGTTA CCTATCTGCG CTTTCCAGAT GAAGGGCATG GAATATCCAA AGTAGTCAAT 
CAAGTTACTT TTTATCAGCA ACTTGCCGAC TTTTTACAAG TTCACTTAAT TGATTAA 

 

Protein sequence

MKMLFFITLL FAQSLLSKEW PYPQDTPQTK PINIGTASDR PYDISRLILA RGPYNASLNP 
QGTIAAYMSD VSGAPQLWLI HIKDKKVTQL TFGNGITHYL WHPNGKELIY GADNNGDERE 
AFNLISIDGL HEKIVLPFTD AYRVPGWFDT SGRHFAYSST ERNGRDFDIY VVDFNAQSNK 
LTPRLMYQAE YFFRPHQWQP NGEHLIVTEA VGEDGANVYL LNNSNGKMSS VFKPQIPSSY 
GNFVWSASGE SFYFTSNEGQ EMNALRQYDL SSATERTLFS GDYDIENVQV CKQGTYLVWT 
TNENGFDKLH IYHLQRDNQQ QIPLPQGVYS LSCAEQGKDL LVRITGPATP GSLYLVDLTN 
QQTELLLAPN MAGVDNAEML SPIAVSMPAR DGVTIFGLLY LPISKQDTSP PIIFNVHGGP 
ASQSRASWKP AIQYLLGKGV AVLDINVRGS TGFGKTYAQL DNQEKRLDSV RDLVDALAWF 
KKEGTVNVDR SAVMGRSYGG YMVNAVMGAY PDAFSAGISI VGVADWVTAL KTASPALKAS 
DRIEYGDINE TRWQKFYAEN SPINTVHKIN APMFYEHGVN DPRDPVAESD IMVKTLREKG 
LPVTYLRFPD EGHGISKVVN QVTFYQQLAD FLQVHLID