Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0190 |
Symbol | |
ID | 4171736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 225275 |
End bp | 226717 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053189 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_659776 |
Protein GI | 109896521 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.498345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTAATC TGGTTGAACA AAACCTGCTT ACTGCCGCTA ACCTCGACAG AGACCATCTT GCAAACGCGT TAGATGCCAT TTATCAACAT GATAATGATT TTGCTGATCT GTATTTTCAG GCCAGCCAGC ACGAAACGTG GGTGCTCGAA GACGGCATCA TTAAAGATGG CAGCTATAAC GTCGAGCGCG GTGTAGGTGT GCGTGCTGTT AGTGGCGAAA AAACCGGGTT TGCTTATTCT GATGACATCA ACCCAGAAGC GTTGATGCAA GCGGCAAAAG CCTCGCGCAA CATTGCAAGT GCGGGGGGCA AGCACAAAGT GACAGGCCTT AAAAACAGCA AGGTTGACCC TAAGTACCAT GCTGACAATC CTATTTTAGG TATGCAAGAC GAAGAAAAAA TAGCCCTTTT ACGTGCGGTT GATAACTACA TTCGCCAGCA AGAAAGCGCA CTAAGCCAAG TGGTTGTGAG CATCAGTGGT GTTTACGAAG AAGTGTTAAT TGCTGCTACC GACGGTACGT TTTGCACTGA TATTCGCCCA TTAGTACGTT TGAACTGTTC CGTGTTAATG GAAAAAGACG CTCGTCGCGA GCGTGGTAGC TCAGGCGCGG GTGGCCGTTA TGCCTATGAA TATTTCCTAA GCCAAGCTGA TGGGCGCCCA CTTTACGAAC AAATTGCTGA CGAAGCCATT CATATGGCGC GGGTAAACAT GCGCGCAGTG GCCGCACCTG CAGGTCAAAT GCCGGTGGTG TTAGGCAGTG GCTGGCCAGG AGTATTATTA CATGAAGCAG TAGGGCATGG GCTTGAAGGA GATTTTAACC GCAAAGGCGC ATCGACATTT AGCGGGCGCA TGGGGGAGCA AGTTGCTTCA GCAGGTTGCA CCATAGTGGA CGATGGCACA TTGGCTAATC GCCGTGGTTC GTTGTCGGTC GATGATGAAG GCACCCCAAG CCAGTACAAT GTATTGATCA AAGACGGCAT TCTGACTGGC TATATGCAAG ATAAACTCAA TGCGCGTTTG ATGGGTGTTA AGCCTACTGG TAACGGTCGC CGTGAGTCAT ATGCACATTT GCCTATGCCG CGCATGACCA ACACCTATAT GTTGGGTGGG CAACATGAGC CAGAAGCAAT TATTGCCAGC ATCAAGAATG GAATTTATGC ACCCAACTTT GGTGGTGGTC AAGTAGACAT TACTTCAGGA AAGTTTGTGT TCTCTACCTC AGAAGCGTAT CTCATTGAGA ATGGTAAGGT CACTAAGCCG ATTAAGGGCG CTACACTGAT CGGCAACGGC CCAGAAGCCA TGCAAAAGGT TTCTATGGTG GGTAACGATT TAGCGCTAGA TAAAGGCGTT GGCGTGTGTG GAAAAGATGG CCAGAGCGTG CCAGTGGGGG TTGGCCAGCC TACACTTAAA GTGGATGAAC TAACCGTAGG CGGTACAGCC TAG
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Protein sequence | MSNLVEQNLL TAANLDRDHL ANALDAIYQH DNDFADLYFQ ASQHETWVLE DGIIKDGSYN VERGVGVRAV SGEKTGFAYS DDINPEALMQ AAKASRNIAS AGGKHKVTGL KNSKVDPKYH ADNPILGMQD EEKIALLRAV DNYIRQQESA LSQVVVSISG VYEEVLIAAT DGTFCTDIRP LVRLNCSVLM EKDARRERGS SGAGGRYAYE YFLSQADGRP LYEQIADEAI HMARVNMRAV AAPAGQMPVV LGSGWPGVLL HEAVGHGLEG DFNRKGASTF SGRMGEQVAS AGCTIVDDGT LANRRGSLSV DDEGTPSQYN VLIKDGILTG YMQDKLNARL MGVKPTGNGR RESYAHLPMP RMTNTYMLGG QHEPEAIIAS IKNGIYAPNF GGGQVDITSG KFVFSTSEAY LIENGKVTKP IKGATLIGNG PEAMQKVSMV GNDLALDKGV GVCGKDGQSV PVGVGQPTLK VDELTVGGTA
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