Gene Patl_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0136 
Symbol 
ID4172163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp163800 
End bp164396 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content46% 
IMG OID638053135 
ProductYceI 
Protein accessionYP_659722 
Protein GI109896467 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTCA CCAAAAATAC CACGTTTGTG AAACTGGTCG CTTTTTCCAG CCTACTCGTA 
TGTGCTAGCG CGTCTGCCGA TTGGCAGCTT CTTAACAAAG ATTCTCAGTT AAATTTCATT
TCTACCAAGA ATATCAAAGT CAGTGAAATT CATCATTTTT CCAATCTAAG CGGCTCACTG
ACCAGCGCAG GTGAACTAAC GGTTGATATC GATTTATCAT CAGTAGAAAC CGGCATTGAT
ATTCGTAACG CTCGTATGCG CGAAAAGCTG TTTATGGTCG AAAACTTTCC TAAAGCAACG
TTAACCGCTA GCCTGCCAAA AGAAATCGTC GCGTTTACTA AAGGCCAAGC CGGCACCTTC
ACTATCCCCG CTAAGTTGAG TGTACTAGGG CAACAGAGGG ACGTTGAAGT GAACGTGCAA
GTGACGAAAA CCGATCACAA TCGCTTTGTT GCGACCAGCG TGCAACCTGT CATGATTAGC
GCAGGGGATT ATGGCTTACA AGACGGGATC GACTGGCTAC AAAATGTTGC GGGCCTGTCT
AGCATCAGCC CTAATGTACC GGTAACGTTC AACTTAACCT TCATCGAATT GATGTAA
 
Protein sequence
MTLTKNTTFV KLVAFSSLLV CASASADWQL LNKDSQLNFI STKNIKVSEI HHFSNLSGSL 
TSAGELTVDI DLSSVETGID IRNARMREKL FMVENFPKAT LTASLPKEIV AFTKGQAGTF
TIPAKLSVLG QQRDVEVNVQ VTKTDHNRFV ATSVQPVMIS AGDYGLQDGI DWLQNVAGLS
SISPNVPVTF NLTFIELM