Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0124 |
Symbol | |
ID | 4171806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 148122 |
End bp | 148991 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053123 |
Product | ATPase, BadF/BadG/BcrA/BcrD type |
Protein accession | YP_659710 |
Protein GI | 109896455 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAT ACTATTATCT TGGAATTGAT GCAGGTGGCA CACAATGCAA AGCGTCTCTG TACAGCCATG ATCAACAATT ACTCACCACA GGAATAAGTG GGCCAAGCAA CCCTGTAAAT GGGCTGGAAA TCGCCCAAAA TGCCATAGTT CAAGCTGCAG AATCTGCCCT GAGTGCAGCG TCTTTGCCTC ATGTTGGTTT GAATCAATTG TGTGTTGGGG CAGGAGTTGC AGGTTTGCAT TTACCCAGCC TTCAAGAGGC CATGGAGCAG TGGCAGCACC CTTTTCATTC ATTTTATTGC ACCACAGATT TGCATGCCGC GGTAACGGGC ATGCATCAAG GGCAAAACGG CGGAGTCATT ATTCTGGGCA CCGGCTTTAG TGCGTTAGGT ATGGTGGATG GGGCAATGCA CTCTATCGGT GGTTACGGCT TTCCTATTAA TGCACAAGGC AGCGGTTCAT GGCTTGGGTT GCAAGCCGTT GAAGCTGTGT TGCTCGCACA TGACGGTATT GGTCCGCACA CTAGCCTCAT CGCTGGCATG ACCAAAAACG AAGATATTAT GTCTTTGGCT ACACGACTTA ATCAGGGCAC CTCCACAGAA TTTGCCGCAT ACGCACCGCT GGTGTTTGAA CACGCTGAAC AAGGTGACTT ACTGGCAAAA GGCCTTATCG AGCAAGCCAC TGAATTTTTG CAGCGGGTTA TTTTGCGCCT CAATGATTTA GGGGTCGAAG AGGTCGTTTT GGTTGGCAGT GTTGCTCTGC GCTTACAAAG TCGCCTAGAG GCGACGGTGA ATCAAGCCAT AGTGCCCGGC AAAGCCTCAG CAGAATATGG CGCCATGTTA CTGGCCAAAC AACATAACCC AAATCAATAA
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Protein sequence | MAEYYYLGID AGGTQCKASL YSHDQQLLTT GISGPSNPVN GLEIAQNAIV QAAESALSAA SLPHVGLNQL CVGAGVAGLH LPSLQEAMEQ WQHPFHSFYC TTDLHAAVTG MHQGQNGGVI ILGTGFSALG MVDGAMHSIG GYGFPINAQG SGSWLGLQAV EAVLLAHDGI GPHTSLIAGM TKNEDIMSLA TRLNQGTSTE FAAYAPLVFE HAEQGDLLAK GLIEQATEFL QRVILRLNDL GVEEVVLVGS VALRLQSRLE ATVNQAIVPG KASAEYGAML LAKQHNPNQ
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