| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0106 |
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| Symbol | |
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| ID | 4171788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 120150 |
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| End bp | 121289 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053105 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_659692 |
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| Protein GI | 109896437 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.856093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA ATTTATCTGA AGAACAAAAC ATGCTCAAAG ACAGCGTTGC GCGCTTTGTG
CAAGACGAAT ACGACTTTGA AGCACGCCGC AGCAATGCCG CCAATGCATT AGGGTTTAAT
CCTGACAATT GGCAAACTTT CGCAGAGTTG GGTTGGTTGT CTATTCCATT TGAAGAAGCT
TACGGTGGTT TTGGTGGTGG TCCCACTGAC GTCATGGCCG TTATGGAAGA AATGGGCAAA
GGCCTAGTGG TTGAACCGTT TGTGGCAACC GTGCTGATGT TCGGTGGTTT ATTGAGTAAA
AGCGGCAACG CAGCACTGAA AGATGCGAAT ATTGAAAAGA TCATTGATGG CTCACTGCAA
GGCGCATTTG CTTATGTTGA GCGTCAAAGC CGTTTTGAAC TAGCGGACGT GAAAACCCAA
GCAAAGCGTG ACGGTGATGA CTTTGTACTT AGCGGTGAAA AAACCGTTGT GTTCAATGGT
GCAGCCGCCA ACAAGATGAT TGTGTCAGCC AGAACCTCAG GCGATCAGTG CGATGAAGCA
GGTATCACTC TGTTTTTGAT TGATGCAGAT GCACCGGGTG TACAACGTAC GGCTTACCGC
TTAATGGACG GTCAGTTAGT CGCTAACATT AAACTCACCG ATGTACGCGT AGCGGCAAAC
CACGTCGTTG GTGAAGTCGA CGATGGTTAC CAGCTGATAG ATGCTGTGGT TAGCGACGTG
ACGATTGCCC TGTGTGCAGA AGCTATGGGT ATTATGCAAA AGCTCAATAC CACCACCATT
GAATACACTA AAACGCGTCA ACAATTCGGT GTGGCGATCA GTAGCTTTCA AGCGTTGCAA
CATCGCATGG TGGATATGTT TATGGCGGGC GAACAAGCCA AGTCCATTTT ATACCGTGCA
GTGTGTGCTG CAGAAAGCGG AGCCGAAGAT TTAGCTAAAA ATATCGCTGC ACTGAAAGTG
ATGATTGGGC GCAACGGTAA ATTGATTGGT GATGAAGCCA TTCAATTGCA TGGCGGTATG
GGGTTAACGG ATGAGTTAGA TGTAGGCCAT TACGTTAAGC GCCTGATGAT GATTAACACC
ACCTTCGGTG ATGCAGATTA TCAGCAACAG AAGTTTAACC GTTTAGCTTA TACAGACTAA
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| Protein sequence | MNFNLSEEQN MLKDSVARFV QDEYDFEARR SNAANALGFN PDNWQTFAEL GWLSIPFEEA
YGGFGGGPTD VMAVMEEMGK GLVVEPFVAT VLMFGGLLSK SGNAALKDAN IEKIIDGSLQ
GAFAYVERQS RFELADVKTQ AKRDGDDFVL SGEKTVVFNG AAANKMIVSA RTSGDQCDEA
GITLFLIDAD APGVQRTAYR LMDGQLVANI KLTDVRVAAN HVVGEVDDGY QLIDAVVSDV
TIALCAEAMG IMQKLNTTTI EYTKTRQQFG VAISSFQALQ HRMVDMFMAG EQAKSILYRA
VCAAESGAED LAKNIAALKV MIGRNGKLIG DEAIQLHGGM GLTDELDVGH YVKRLMMINT
TFGDADYQQQ KFNRLAYTD
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