| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0072 |
|---|
| Symbol | |
|---|
| ID | 4171772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 85401 |
|---|
| End bp | 85811 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638053070 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_659658 |
|---|
| Protein GI | 109896403 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3245] Cytochrome c5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.663637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAAAA TAGTGAAACG TAAATTTTTA TTGTGCATGT TTTTAGGCTT AGCATCGATT
TTCACAGCTA ATGCAGCGGT TAACTCTGAT GATGAAATAA AATCACGTAT TGCCCCGGTT
GGCAAAGTGC ATGTTGCCGG CGCCAAAGCT GAAACAGCAT CTGCTGGCGG ACCTCGTTCT
GGCGCTGACG TTTATGGAGC TGCGTGTGTG GCGTGTCATA GCTCTGGTGT TTTGGGTGCA
CCAAAATTCC AAAATGCTGC TGATTGGGCA CCTCGCTTAG AAAAAGGCTT CGATACTGTA
TGGCAAAATG CCATTAACGG TATTAATGCG ATGCCTCCTC GTGGAACGTG CGCTGATTGT
TCAGATGACG AGATAAAAGC AGCTATCGAA CACATGACAG AAGGTCTGTA A
|
|---|
| Protein sequence | MEKIVKRKFL LCMFLGLASI FTANAAVNSD DEIKSRIAPV GKVHVAGAKA ETASAGGPRS
GADVYGAACV ACHSSGVLGA PKFQNAADWA PRLEKGFDTV WQNAINGINA MPPRGTCADC
SDDEIKAAIE HMTEGL
|
|---|
| |