| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0054 |
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| Symbol | |
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| ID | 4171888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 63548 |
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| End bp | 64951 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053052 |
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| Product | hypothetical protein |
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| Protein accession | YP_659640 |
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| Protein GI | 109896385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.2662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACGTT ATTGGGTAAT CGGCTTTTTG CTAGTCGCGT CACAAGGATG GGCGAAAGGA
CTTTCCCCCT ACCTTCCGCT ACAAATTTCA CCTGAAATTG AATCTCAGAT AGAAAAAGTC
ATGGCACTGA CCCCTGGGGC ACCCCTTACC AAGCCGTACA AAGCGGTTGA TATTATGCGC
CGCAACAAAC TTATTGCCAC ACGATTTCCT GAGCTTCACC GCTCGGTTGA CGCTTATTTA
GCCCGGTTTA AAGATACGTT AGCGTTAACC CATGTGAGCG CATCAATATC GGCAGGTGAC
GATGAAAGCA GCCCTGTGCC GAATCAAAGA GGTATTAAAC GCGACTCCAG CTACCAAATC
TCGGCTTCTG GCGTGGCTTT TATCTCACCT TATGCCTATG TGGCAGGCGG TGCCTTGTAT
GCTGATGGCG AAGATGCCAT ATTGTATAAC ACCCATGTCG CCTTTGGTTA TGAGTACGCA
CAAATCGAAG CGGGTTACCG AGAACACTGG TTATCGCCAA TGCAAGATTC AGCTTTATTA
AGTAGTACCA ACGCCGAGCC AAGCCTGTCT GTTACTGTGA GTAACGCCAC CCCTATCACA
GATTGGGGTA TCCGATATGA GCTGTTTTAT TCGAAGCTTG AAGATACGCT GGGCGTTAGC
CAACAAGGTG AATTGTTCAG TGGTGAACCC AATCTATTAG GCTTTCACTT GAGTGTATCC
CCTGTTGAAG CGTGGACCAT AGGCTACAGC CGCACCCTGA AATATGCTGG AGCGAATAAC
AACTTGAGTG TTGGTGATGC TTTCCAAGAT TTATTCAGCC CCTCAGGTGA AGATAAAACA
CCTGAACTTT ATCCTCAAGC GTTAGCAAGC GATCAGAAAA CGGCAATTTC CAGTAAAATT
AATTTACCCT TCGCTTTCCC TGTATCTCTT TATGGCGAGA TTGCCTTTGA CCACGCTCCT
GAAAGCAAGG ATCAAGAAGC AGATGACAAA GCCCTTGCTT TTGGGGTCTA TTTCCCTATG
GTAACCAACA ACCTGTCTTT GCGATATGAA TTCACTCGCT TAGACGAGCT TTTCTACCAA
TCCAGCTTCT ACACCACAGG TTACACCAAT GAAGGCTTAT CACTTGGTCA TTGGGCGAGC
GATCTTTTTG CTTCCCAAGA TCAGGTTCAA AAGACAACGC ATTCGGTCAA CATGAATTGG
AAATTTGCGT CTGATCAGGT TATTGATATC ACATTCAGAA GTGCAGATAG CGACATGAAC
TCAAACACGG AACAAGCATT CAAGGAATTA ACGGTGCGTT ATAGTTACGC GACACAATAC
GGTTTCTGGG GTATTGATCT TGATGTAGGT GAAGATCGTT TTGGCGAACA ATTTAAACGA
GTAAGTGCAT TTTACCGCTG GTAA
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| Protein sequence | MSRYWVIGFL LVASQGWAKG LSPYLPLQIS PEIESQIEKV MALTPGAPLT KPYKAVDIMR
RNKLIATRFP ELHRSVDAYL ARFKDTLALT HVSASISAGD DESSPVPNQR GIKRDSSYQI
SASGVAFISP YAYVAGGALY ADGEDAILYN THVAFGYEYA QIEAGYREHW LSPMQDSALL
SSTNAEPSLS VTVSNATPIT DWGIRYELFY SKLEDTLGVS QQGELFSGEP NLLGFHLSVS
PVEAWTIGYS RTLKYAGANN NLSVGDAFQD LFSPSGEDKT PELYPQALAS DQKTAISSKI
NLPFAFPVSL YGEIAFDHAP ESKDQEADDK ALAFGVYFPM VTNNLSLRYE FTRLDELFYQ
SSFYTTGYTN EGLSLGHWAS DLFASQDQVQ KTTHSVNMNW KFASDQVIDI TFRSADSDMN
SNTEQAFKEL TVRYSYATQY GFWGIDLDVG EDRFGEQFKR VSAFYRW
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