| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0052 |
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| Symbol | |
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| ID | 4171886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 61839 |
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| End bp | 62912 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638053050 |
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| Product | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase |
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| Protein accession | YP_659638 |
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| Protein GI | 109896383 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC ATTACCTTTT TTACATCTCC GAAAATTATG CATTTCAAAT ACTGCGCCCC
TTGCAGGACG AAATTCAAAG AAGAGGCGAT ACCGTCGCTT GGTTTGTAGA AGGTAACAAC
GTCAACAGAG CTTATTTCAA GCCCCATGAA ACGCAACTAC CTGATGTTCA GGCCGTCATT
GATTTTCACC CTATTGCCGT ATTTGTTCCT GGTAATATGA TTCCGTCATT TATCCCTGGC
TTGAAAGTCT GTGTCCGCCA TGGCTTCATT GGTTTTAAAA CTCGTAAAAA AGACGGTTTG
AACTATTCGT TTATTATTCG AGATTGTTTT GATTTGTATT GTACGCATGG GCCATCAATG
ACCGACACAT TCAAATTACT GGAGCAAAAG CATCAGTTCT TCAAAGTAGT CGAAACAGGG
TTTTGTAAAA TGGACCCGTT TTTTGATCGT TCAATGGTTG CTGAGAAGGA CGCTGCCGCT
AACACAACAG CACAAAGGGA CGAGCGCCCA GTGGTGTTAT TTTCATCCAC ATTTTCTCCT
CGAATGTCTC AAGCCGAAGC GCTTTTGCCA ACCATTAAGC GCTTATCTCA AGATACTAAA
TGGCGTTGGT TAGTGACCTT CCATCCTAAA ATGGCACAAA GTACGGTGGA TGCCTATAAA
GCCGCTCAAC ATGAGAATTT AACTTTTATC GAAACCGATA ATGCCATGCC ATTAATGCTC
GAGGCTGACT TAATGCTTGG GGATAATTCA TCTATGCTGG TTGAGTTTTT AATGTTGAAC
AAACCTGTGG TGACCATGAA AAATGAGCAT CCTAAGCCGC ATTTTATTAA TGTTACCGAT
GCTGAAAAAA TTGAAGAAAG CATAGAATAC GCATTAACTA GGCCGCCTGA GTTGATGGAT
AAATTAGACG ACTATGCAGC GCAAACTCAC CCTTACACTG ATGGTCAGTC AAGTGCTCGT
ATAGTAGATG CCACACAAGA CATGCTGGAC AATCCCCCTA AGTTGAAAAA TAAGCCGTTC
AATCTAATCC GAAGTATCAA AATGCGTAAA AAGCTAGGTT ACTGGAGGTG GTAA
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| Protein sequence | MAKHYLFYIS ENYAFQILRP LQDEIQRRGD TVAWFVEGNN VNRAYFKPHE TQLPDVQAVI
DFHPIAVFVP GNMIPSFIPG LKVCVRHGFI GFKTRKKDGL NYSFIIRDCF DLYCTHGPSM
TDTFKLLEQK HQFFKVVETG FCKMDPFFDR SMVAEKDAAA NTTAQRDERP VVLFSSTFSP
RMSQAEALLP TIKRLSQDTK WRWLVTFHPK MAQSTVDAYK AAQHENLTFI ETDNAMPLML
EADLMLGDNS SMLVEFLMLN KPVVTMKNEH PKPHFINVTD AEKIEESIEY ALTRPPELMD
KLDDYAAQTH PYTDGQSSAR IVDATQDMLD NPPKLKNKPF NLIRSIKMRK KLGYWRW
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