| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0045 |
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| Symbol | |
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| ID | 4172890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 56671 |
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| End bp | 57924 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053043 |
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| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase |
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| Protein accession | YP_659631 |
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| Protein GI | 109896376 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
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| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00115408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTA TGCAATTAGC CCAACAGAAG ATCCTACTTG GTATAACAGG CGGTATAGCA
GCCTACAAAA CCCCAGATTT AGTCAGAAAA CTCACTGCGC TTGGCGCACA GGTACGTTGC
GTGATGAGTG CTTCAGCAGC AGAATTCGTG AGCCCACTGG CTTTACAGGC GGTCTCAGGT
AACCCTGTAG GTGATGACCT ACTGGATCGT ACCGCGGAAG CCGCTATGGG CCACATAGAG
CTGGCAAAAT GGGCTGATAA AGTGCTTATT GCCCCTGCTA CGGCAAATTT CATGGCCAAA
CTCACCCATG GCTTAGCCGA TGATTTGTTA TCCACGTTAT GCCTAGCCAC CAGCGCACCG
ATGTATATTG CCCCTGCGAT GAATCAGCAG ATGTGGCATG CGCAGGCAAC ACAAGCAAAC
CTCAATATTT TACAACAAAG AGGCGTCACC ATTTTAGGGC CAGCTCCCGG CGAGCAAGCC
TGTGGTGATA TCGGCCTAGG GCGAATGATA GAGCCGATTG ATATCGCCAA TATGTTAGCC
CAAAGTCCAA TGGAGCCCTT GCTCGCTAAC AGGCATATTG TGATTACGGC AGGGCCAACA
CGGGAAGAAA TCGATCCCGT GCGCTTCATT AGCAATCACA GCTCAGGAAA GATGGGCTAC
GCATTAGCGA AAGCGGCTGT TGCTTTAGGT GCAAGAGTCA CATTGGTATC AGGGCCGGTG
AATTTGACGC GCCCAGTAGG TGTTGATGTC ATTGATGTGG TCAGTGCAGA GCAAATGCAC
AATGCCGTTA TGACAGCCGT GAGCAAGTCC CAAGTTAATG ACGCGCAGTC AGATAGCATG
CAGCTTAATT GCGACATATT CATCGGTTGT GCAGCCGTAG CAGATTACAA GCCACAGCAA
AAAACCGAGC AAAAGATTAA GAAGTCCGAT ACGGAGTTAA CACTTACTTT TACTAGAAAC
CCTGATATCC TTAGTGATGT TGCCCATTTA GCTCAACCCC CTTTCACGGT TGGCTTCGCC
GCTGAAACGC AAGACGTGGC TCATTACGCA CAAGACAAAC TGAAACGCAA AAAGCTCGAT
ATGATTGCCG CAAACGACGT ATCCCAAGCC GGTTTAGGCT TCAATAGCGA GCAAAACGCA
CTCAATGTTT ATTGGAATAA TGGTGGAAAA AACCTTGGCG TTGCCGATAA GAGTCAGTTG
GCGATTTCGC TATTGACCTT AGTTGCTCAG CGTCACGCAT TAAAAACAAC ATAA
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| Protein sequence | MIPMQLAQQK ILLGITGGIA AYKTPDLVRK LTALGAQVRC VMSASAAEFV SPLALQAVSG
NPVGDDLLDR TAEAAMGHIE LAKWADKVLI APATANFMAK LTHGLADDLL STLCLATSAP
MYIAPAMNQQ MWHAQATQAN LNILQQRGVT ILGPAPGEQA CGDIGLGRMI EPIDIANMLA
QSPMEPLLAN RHIVITAGPT REEIDPVRFI SNHSSGKMGY ALAKAAVALG ARVTLVSGPV
NLTRPVGVDV IDVVSAEQMH NAVMTAVSKS QVNDAQSDSM QLNCDIFIGC AAVADYKPQQ
KTEQKIKKSD TELTLTFTRN PDILSDVAHL AQPPFTVGFA AETQDVAHYA QDKLKRKKLD
MIAANDVSQA GLGFNSEQNA LNVYWNNGGK NLGVADKSQL AISLLTLVAQ RHALKTT
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