Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0010 |
Symbol | |
ID | 4171835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 12372 |
End bp | 12944 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638053004 |
Product | DNA-3-methyladenine glycosylase I |
Protein accession | YP_659597 |
Protein GI | 109896342 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACATA TACGCTGTGC ATGGGTTTCA CAGGATCCCA TATATCAAGA ATATCACGAC AAAGTTTGGG GTCGCCCAGT AAGAAACAAA TATGAGCTTT TCGCTAAATT ATGCCTAGAT GGCCAACAAG CTGGTTTGAG CTGGATAACT ATTCTAAAAA AACAGCAAAA CTATTATCAA GCCTTTCATC AATTTGACCC GCAACGCATC AGTGAAATGA CAGAAGATGA TGTTGAACGC TTAATGCAAG ATAAAGGGAT CGTTAGAAAC AGACTTAAGA TAAATTCAAT TATTAAGAAT GCTAAGGGGT TTCTCGAAAT AGAACGTGAA GGCACTGACT TTTCAGAATT CATTTGGTCT TTTGTCGCAA ACGAACCGAT CATAAACGCT TGGGCTGAGA AAAGTCAGGT ACCTAATACC TCTAGCGAAT CTGATGCGAT GGCCAAGGCC TTGAAAAAGC GCGGCTTTTC ATTCGTGGGA AGCACTATTT GTTACGCCTT TATGCAAGCC GTTGGGTTGG TTAATGACCA CACCCAAGAC TGCTTTTGTT ACCCAGTTAA TGAAAAGAGA TAA
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Protein sequence | MQHIRCAWVS QDPIYQEYHD KVWGRPVRNK YELFAKLCLD GQQAGLSWIT ILKKQQNYYQ AFHQFDPQRI SEMTEDDVER LMQDKGIVRN RLKINSIIKN AKGFLEIERE GTDFSEFIWS FVANEPIINA WAEKSQVPNT SSESDAMAKA LKKRGFSFVG STICYAFMQA VGLVNDHTQD CFCYPVNEKR
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