Gene Pars_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2242 
Symbol 
ID5054668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2009425 
End bp2010234 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content61% 
IMG OID640469795 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001154440 
Protein GI145592438 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.374891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG GCGTTTTCAT CTTGCTGGGT ATTGTACAGG GCGTGGCGGA GTGGTTGCCC 
ATAAGCAGTA AGACCCAAAT CATGTTCGTC GCCACGGCGC TGATGGGCTA CTCCCCGGCT
TTGGCCTACT CGCTGGGGCT ATTTTTAGAG GCGGCGTCTG TGATAGCCGC TCTTCTCTAT
TTCAGGGGCG TCTACGCAAG CGCGCTACGC GGCCTTTTGG GCGACAGGGC GGGGCGCAGG
TGGCTTACCT ACTTCGTGTT CACCACCGTG GTTACCGCGG TTGTTGGCTT GCCGCTCTAC
CTCACGGCGA GGACATCCTT AATGGGAAGC GCCGCCGCGG GGTGGCTAAT GATCGCGCTG
GGCCTCGCGG TTATGCTTAA CGCATTTCTC TTGCAAAAGG CAAAGCGTAC CGCCGCCGGC
CTGAAAACGT TTGGCGACAT GACTCTACGC GACATGGCTC TTGTGGGCAT CGCCCAAGCC
CTCTCTGTAT TGCCCGGGGT GAGCAGATCA GGAGCTACCA CGTCCGCTCT GCTGTTGCTG
GGCTATAAGC CAGAGGAGGC TTTCAAGGCG TCGTTTGCCC TAGTCCCAAT AGCTGGCCTA
GGCGCGGCGG TTTTGTCGTA TCTGACTGAA AAGGGCGCGG TCGCCACGCC GGAGGCCGCA
TTAGCCATGG CGGTCGGAGT AGTGGTAAGC CTGGCAACGA TCAGCGCCTT GTTGAGATTT
GCCAAGAGCG GCCGCGCCGC CTTGGTGAAC GTCGTGGTGG GGGCATTGGC GGTGGCTGGG
GGCATTGTCA GGCTGTCGGC GCCCGGATAG
 
Protein sequence
MDIGVFILLG IVQGVAEWLP ISSKTQIMFV ATALMGYSPA LAYSLGLFLE AASVIAALLY 
FRGVYASALR GLLGDRAGRR WLTYFVFTTV VTAVVGLPLY LTARTSLMGS AAAGWLMIAL
GLAVMLNAFL LQKAKRTAAG LKTFGDMTLR DMALVGIAQA LSVLPGVSRS GATTSALLLL
GYKPEEAFKA SFALVPIAGL GAAVLSYLTE KGAVATPEAA LAMAVGVVVS LATISALLRF
AKSGRAALVN VVVGALAVAG GIVRLSAPG