Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2211 |
Symbol | |
ID | 5054825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1983592 |
End bp | 1984203 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640469764 |
Product | proteasome endopeptidase complex |
Protein accession | YP_001154409 |
Protein GI | 145592407 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.208664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAGG AGGTGCAGAT TGGGGCAACT GCAGTTGGCA TCAAGGCGAA AGATGGGGTT GTCCTAGCCG CTGAGAAGCG GGTCTCGTAC GGGTTCTACA CTCTCAGCTC CGCGGGGAGA AAAGTATTCG TAATCGACGA CAAGTTGGCT ATAGCGTCGG CAGGCATAAT TGCCGATATG CAGTCCCTGG CCCGGATCGT TAAGATCAAC GCCAAGGCGT ATGAACTGGA GACGAGGAAG AAGCCAACTG TCAGGTCGAT GGCTAAACTG CTCTCGGTGA TTATGTTTAG CAGGAGGTAT ATGCCGTTTT TCGCAGAGGT GCTAGTAGGT GGCGTAGACG AAGAGGGTAG CCATCTAATC GTGATGGATC CCCTCGGCAG TTTGATCGAG GACAACTACG CCGCCTTGGG CACCGGCGCT AAACTCGCCA TCTCCGTGCT GGACACGGGC TACAGGGAGG ACATAACTCT TCAGGATGCT AAGAAACTCG CGGTGAAGGC TCTGAAAGCG GCAATTGAAA GAGACCCTGT CTCGGGGGGC GGCATAGATC TGGTATTGAT TGACCAGACA GGTGCAAAGG AGGAGGAGGT CAAAGTACAG CTACTGATAT AG
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Protein sequence | MGEEVQIGAT AVGIKAKDGV VLAAEKRVSY GFYTLSSAGR KVFVIDDKLA IASAGIIADM QSLARIVKIN AKAYELETRK KPTVRSMAKL LSVIMFSRRY MPFFAEVLVG GVDEEGSHLI VMDPLGSLIE DNYAALGTGA KLAISVLDTG YREDITLQDA KKLAVKALKA AIERDPVSGG GIDLVLIDQT GAKEEEVKVQ LLI
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