| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2063 |
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| Symbol | aksA |
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| ID | 5056297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1844745 |
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| End bp | 1845914 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640469612 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_001154261 |
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| Protein GI | 145592259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.214289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGTTGT CCGCCTATGG CTTCGGGGCT CGTACAATAA GGATATTCGA CACAACTCTC
AGAGACGGCG AGCAGATGCC CGGCGTCGCC TTGTCACCTT CTGAAAAGTT GCAAATCGCC
CTAGCTCTAG ACGAGGCAGG TGTAGACATG ATAGAGGCGG GTTTTGCCGC GGTCTCAAAA
GACGAACAGA TGGCCATTAG GCAGATCTCT AAAGAAGTGG CGACAGCCAA GGTGGTTAGC
CTTGCCCGCA TGGCGAAATC TGACGTCGAC GCGGCTCTCG ATGCCGATGT GGATATGATC
CACTTGTTCA TTGCCACGTC TGATATACAC CTGAAGTATA AGCTTGGCAT TACGAGGGAG
GAGGCCATTA GGCGGATAGA GGAGGTGGTC TCATACGCCA AATCGCACGG GGTCGACATA
TTGTTCAGTG CAGAAGACGC CACAAGGAGC GACCTAGATT TCCTGGTGGA GGCTTATAAG
ACAGCTATCA GCGCCGGCGC CGACGAGATC AACGTCCCAG ACACGGTGGG TGTGATGACC
CCTAGCCGGA TGGTCTATCT TATAGGCTAC CTAAAGCAGA GGCTCCCCCC GGTGCCTATG
CACGTCCACT GCCACGACGA CTTCGGCATG GCTGTGGCCA ATACAGTAAC CGCCATAGAA
AACGGCGCCG ACGTGGCGCA GGTGGTTGTT AACAACTTCG GCGAGAGGGC CGGCAACGCG
GCGCTGGAAG AGGTAGTAGC CGCAGTGCAC TACCTGCTTG GCTACAAGAC AAATATCAAG
TTGGAGAAAC TCTACGAGCT GTCGCAGTTA GTGTCTAAAC TATTCGGCAT CCCCGTGCCG
CCGAATAAGG CGGTGGTGGG GGAAAACGCC TTCAGCCACG AGGCCGGCAT CCACGTACAC
GGCGTTTTGA ACAACCCATT CACCTACGAG CCTATGAGGC CTGAAGACGT GGGCAATCGG
CGCAGGATAG TCCTCGGAAA GCATTCGGGG AGACACGCGG TGGTGTGGGC TTTGAAGAAC
ATAGGCGTCG AGCCCACAGA CGACTTGGTG GACTACGTCT TAAACGCCGT GAAGGAGCTG
GCTGTGAGGA AAGTAAAGGT GGACGAGTCT GTTCTTAGGC AAGTCGTAAA TGATTATAGG
AGGGGGGTAT TTGTACCCTA TGCCGTATAA
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| Protein sequence | MKLSAYGFGA RTIRIFDTTL RDGEQMPGVA LSPSEKLQIA LALDEAGVDM IEAGFAAVSK
DEQMAIRQIS KEVATAKVVS LARMAKSDVD AALDADVDMI HLFIATSDIH LKYKLGITRE
EAIRRIEEVV SYAKSHGVDI LFSAEDATRS DLDFLVEAYK TAISAGADEI NVPDTVGVMT
PSRMVYLIGY LKQRLPPVPM HVHCHDDFGM AVANTVTAIE NGADVAQVVV NNFGERAGNA
ALEEVVAAVH YLLGYKTNIK LEKLYELSQL VSKLFGIPVP PNKAVVGENA FSHEAGIHVH
GVLNNPFTYE PMRPEDVGNR RRIVLGKHSG RHAVVWALKN IGVEPTDDLV DYVLNAVKEL
AVRKVKVDES VLRQVVNDYR RGVFVPYAV
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