Gene Pars_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1992 
Symbol 
ID5054886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1781473 
End bp1782636 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID640469539 
Productglycosyl transferase family protein 
Protein accessionYP_001154191 
Protein GI145592189 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4346] Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.553318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTATA TATACCTTGG CCTCGCCGTC GTTGTCGCGG TCTTTGCGTA CCTCGCGTAC 
GTGACGGCGC AGTTGCCCGG GTCAGACGGC TTGCCCAACG GTCCTGGCTA CATCTCCGAC
GAGGTATGGT ACGTCACCTC GGCGCGGAAC ATCCTCCACG ATCTTTTCAA GGCGCCGGCT
GCTTCGCCCT ACTTCACTGT TGAGGAGGAG TGCCTAACTA GTGGGAGCGT CGTAGTGAAG
AACTACACGA AAATCGACGC GGTGACAGTG GAGGGGCCCG TCGCGTGTTA TATCAGGAGG
GGCTTCCCCT ACCCAGACAA GGAGGGGATC CTGAGTTATT ATAACCTCGA GCACCCGCCC
CTGGCTAAGT ACGTAATAGC CGCCGTGGAG GCGGTGAGGG ACGAGCCGCC TTTCTGGAGG
CTTCCCTCTA TTGCCCTCGG CGTGGGGACG CTGGTCTTGG TGTTCCTAAC CGCGCGCAGA
CTCGCGGGGG ATATCTGGGC CTTGGCGGCG ACGGCGCTTA TGGTTTTCGA CAACACGTTT
AGGGCGATGG CGGGTATCGC CATGTTGGAC ATATACCTGG CCTTCTTCAC CGCGCTTCTG
GCCTATTTAT ACGTCTCTGG CAGAGTTCTG GCAACTGGAG CAGCCCTAGG CCTAGCCGCC
TCGGTTAAGT ACTCAGGCGC CTTCCCCTTC TTCGGGCTTG CCTACCTCCT GGCGCGGAGA
AGCATCTGGG CCTTCGTATC GGTCCTCCTC ATGGCGATCT CTATCTTCCT CCTCGTCAAT
ATACCAATAG CCGGGCAACT GGGCCTGGGC AGGTGGGTTG AGGAGATCTT GAAGGCGCTT
TCTTGGCACA CCACATCGAG ACCGCCTGGG CCAACGGCGT CCACGCCATT GGACTGGCTA
CTCATGAGAA ACGCCTTCGC CCTCTACATA AACCCCGACA TATACGCAAG CGGAACACCT
GCCTACCTAG TGGCCTTGGC CTTCGCCCTC TACAGACGCG ACGACGTGTC GATACTCTAC
CTATCCACAT ACGGAGGCTA CTGGTTGGTA TATCTTGCAG GCAACCACAC GCTCTACAGC
TTCTACACAG CCCACTTCTC TCCGCTAGCC CACATCGTGC TGGCACAGCT CCTATCTTCA
ATAGCAAATT TCGGCAAGAA ATAA
 
Protein sequence
MRYIYLGLAV VVAVFAYLAY VTAQLPGSDG LPNGPGYISD EVWYVTSARN ILHDLFKAPA 
ASPYFTVEEE CLTSGSVVVK NYTKIDAVTV EGPVACYIRR GFPYPDKEGI LSYYNLEHPP
LAKYVIAAVE AVRDEPPFWR LPSIALGVGT LVLVFLTARR LAGDIWALAA TALMVFDNTF
RAMAGIAMLD IYLAFFTALL AYLYVSGRVL ATGAALGLAA SVKYSGAFPF FGLAYLLARR
SIWAFVSVLL MAISIFLLVN IPIAGQLGLG RWVEEILKAL SWHTTSRPPG PTASTPLDWL
LMRNAFALYI NPDIYASGTP AYLVALAFAL YRRDDVSILY LSTYGGYWLV YLAGNHTLYS
FYTAHFSPLA HIVLAQLLSS IANFGKK