Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1883 |
Symbol | |
ID | 5055688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1689242 |
End bp | 1690225 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640469429 |
Product | putative mRNA 3-end processing factor |
Protein accession | YP_001154086 |
Protein GI | 145592084 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.115808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGATT CTATAAAAAG CCACGTGTTC GTCTTCAAGG TGAGAATCTA CTACGACAGA GGCATCTACG TCGAGGGGCG CGCCGTTAGG TTCGTGGTTG ATCCCGCCGG ACCTATTAAA GGACTTGTGG ACTTTGTTTT AATAACACAC GGACACAGTG ACCACGTCTC CCTACATGCC TATAGATACC CAGCAGTAGC CACAAAAGAG ACCTTCGCCG CCATGGCTGT GAGGTACGGG CGCCCACATC CTAGAAGAAT AGTCGTCTCG CCCGGCGACG TCCTAGAGCT AAACGAGGTC CAGATAGCGG CTTTCGACGC GGGGCACATA CTGGGGAGCG TGATGTACCT AGTCGAGGTG GAAGGCCTCC AGGTGTTGTT CACAGGAGAT TTCAACACCT CCGGCTCCAT ACTCACAGAT GGGGCTGAGC CTGTGGAGAG ACCAGACGTG TTAGTGATGG AGGCCACTTA CGGCGACCCA GCATATGTTT TCCCCAACAG GGCAGAGATC TACGACAGGC TTATAGAAGC GGTGGAGAAA TATGCGTCAG ACGGCGGTGT GGCAATCTCT GCATACCCCC TAGGCAAGGC CCAGGAGGTG GCCAAGCTAT TTGGGAGAAG GGTCGGCGCC CACCGCACAG TAGCCAAGTA CAATGAGGCA CTGGGCATAC AGACGGGAAA GAGCGGCGAG ATTGTGATAG TGCCGAATCT AAGAGCCGCA CCATCCGGAT ACCACAGAAT AGAGGTAAGC GGGTGGTACG TAGACCCCAG ACTCGAGGCG GAGGCCAGGG CAAGAGGCGT CCACGGCCTC CCTCTAAGCG ATCACAGCGA CTTCCCATCC TTAATAGACT TCGTAGCAAA AACCTCACCT AGGCTAGTGT ACACAGTCTA CGGCTACTCC GAAAGACTCG CCATGTACTT AAGGCGAAAA GGTTTTAAGG CATACACGAT ACCAGGGGCC TACGGCCTAA CTCGATATTT CTAA
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Protein sequence | MLDSIKSHVF VFKVRIYYDR GIYVEGRAVR FVVDPAGPIK GLVDFVLITH GHSDHVSLHA YRYPAVATKE TFAAMAVRYG RPHPRRIVVS PGDVLELNEV QIAAFDAGHI LGSVMYLVEV EGLQVLFTGD FNTSGSILTD GAEPVERPDV LVMEATYGDP AYVFPNRAEI YDRLIEAVEK YASDGGVAIS AYPLGKAQEV AKLFGRRVGA HRTVAKYNEA LGIQTGKSGE IVIVPNLRAA PSGYHRIEVS GWYVDPRLEA EARARGVHGL PLSDHSDFPS LIDFVAKTSP RLVYTVYGYS ERLAMYLRRK GFKAYTIPGA YGLTRYF
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