| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1788 |
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| Symbol | |
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| ID | 5055602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1608235 |
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| End bp | 1608984 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640469333 |
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| Product | proliferating cell nuclear antigen PcnA |
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| Protein accession | YP_001153991 |
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| Protein GI | 145591989 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0525119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC AGGTGCTGAC CTACATCGAC GCGAAGGAGT TTGCTTACAT AATAGACTCC
GTGTCGGTCA TTGTGGAGGA GGCTAGCTTT GTCTTGAGAC AAGATGGCCT CCACCTCAGA
GCGTTGGACG TGTCGCGGAC TGCGATGGTA GACCTTTCAA TTCCAAAAGA GGCGTTTGAG
GAATTTCCTG AAGTAGACGA GTTGCGGTTC GGTTTTAATT TTAAGGATTT GAAGAAGCTA
CTAAGGCGGG TTAAGAAGGG CGATAAGATT TCTATCGAGT TTGAAGAGGG GCGGGCTAGG
ATTAAGCTAA TTGGCAAGGC CACTAGATCT ATAACGGTCC CATCCATCGA GATCCTCAGC
GAGGACCTCC CAACTCCCAA GGTGGTCTAC ACAGCTATGG TAAAGACGGC AAGTGATGTG
TTAGCATCGG CTGTAAAAGA TGCTGATGCG GTTGCAGACG AGGCGAAATT CGACGCAAGT
GAAGAGGCCC TTGTAATAAG CGCATCAAGC GACAAGGGCG AAGTGGAGGT AAGGCTTGAC
AAAAACAGCG AGCTTGTTTA CGAATTTGAC GTGAAGGAGC CGGCCTCTGC GAGGTTTTCC
CTAGAATATC TTCTGGATAT CACGAGCAAG ACTTCAAAGA TCAGCGATAT GGTGACCATA
GAGCTGGCCA CAGCAAAGCC GCTTCTCCTA ACCTTCGACA TCCCTGCCGG GGGGCGGATT
TCTTACTACA TAGCACCAAG AGTAGAGTGA
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| Protein sequence | MSKQVLTYID AKEFAYIIDS VSVIVEEASF VLRQDGLHLR ALDVSRTAMV DLSIPKEAFE
EFPEVDELRF GFNFKDLKKL LRRVKKGDKI SIEFEEGRAR IKLIGKATRS ITVPSIEILS
EDLPTPKVVY TAMVKTASDV LASAVKDADA VADEAKFDAS EEALVISASS DKGEVEVRLD
KNSELVYEFD VKEPASARFS LEYLLDITSK TSKISDMVTI ELATAKPLLL TFDIPAGGRI
SYYIAPRVE
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