Gene Pars_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1371 
Symbol 
ID5054096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1233751 
End bp1234245 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID640468916 
Producthypothetical protein 
Protein accessionYP_001153585 
Protein GI145591583 
COG category[S] Function unknown 
COG ID[COG1602] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0299368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGT GTAGGTGTCT TTCAAGCTTG ATTCAGCTCC GCGGCGGGCG TTATCTCTGC 
GGGTTGTCTT ACTGCCCGTT GTTGGTGAGG CAAGCCGCGG CGCCATTTAG ACAGCCGCCG
CCTAAGGAGC TGTACGGCTC CAGCCCCCCT TCCGTATTTG TCGGCAGGGT GGGGTATCCC
AAGGTGAGGC TCTACCCATC ATCGCCGCCG GAGGTTGGAG ACACGACGCC TTATGAAAAC
CCCGGGGAGT GGCTTCACAT GTCTCTAGAG CGCTTCCTCG CAATGAGGCT CTCCTTGTAC
AGAGGAGCCG TCGTGCTTAG AGTTGAAGAC GCGGCGAGGC CCCCCAGGTT GCTTCAAGAC
GTCCAGTTGT TAGCCCTCTC ACAAAGGCCA GTAGAGGTGT ATCTACAATT CCGCAAGCCG
CCCAGAGGCG TGCATTTCAG CGAATACTCG CCGCGCTGTG GGCCTCTATT CGAGGTAATC
ACTGGCGTAG TCTAA
 
Protein sequence
MAMCRCLSSL IQLRGGRYLC GLSYCPLLVR QAAAPFRQPP PKELYGSSPP SVFVGRVGYP 
KVRLYPSSPP EVGDTTPYEN PGEWLHMSLE RFLAMRLSLY RGAVVLRVED AARPPRLLQD
VQLLALSQRP VEVYLQFRKP PRGVHFSEYS PRCGPLFEVI TGVV