Gene Pars_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1342 
Symbol 
ID5055010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1207217 
End bp1208512 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content54% 
IMG OID640468888 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_001153557 
Protein GI145591555 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00457] asparaginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.658334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0839865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGT ACAAAGTTGC GATACCAATA CAAGAGGCGT TACGACGCGG AGAGGGGAAG 
GTCACCCTGA GGGGGTGGGT CCACCGCAAA AGAGTGTTGA AAGAGAAGAT CTTCATACTC
CTCCGCGACT CCACGGGGGT AATCCAGCTG GTCCTTCCCC GCGATAAGTT CAAGGACCTA
GAGGATCTGA ACCTAGAGTC GGCGCTGGTG GTGACGGGGG CTCTCGTGAA AGAGCCGAGA
GCTCCTGGAG GCGTCGAAAT GCACGTGGCG TCTGTGGACT GGGTATATAG GGGAGAGCCC
TATCCGATAA ACGAAGACGC TGTAGTGGCT GACAGCGAGT ATCTACTAGA TGTGAGACAC
CTCTGGATAA GAAGCAGGAA GATGCAAGCC GTCTTGAAAA TAAGACACAC AGTCTTCGGT
GCAATACATG AATACTTTAG GAAAAACGGC TTCTACGAGG TGCACCCACC CATGTTCATA
ACCGCGGCCG TGGAGGGGGG CGCCACGCTA TTCAAAGTAC AGTACTTTGA CAAGATAGTT
TACCTGACAC AGAGCTCCCA GTTTTACCTA GAAGCCCTAA TATACGGACT AGAGAAGGTG
TATACAATCG CCCCAAGCTT TAGGGCTGAG CCGTCGAGAA CCCGCCGCCA CCTCACAGAG
TTTTGGCACG CCGAGATGGA AATTGCCTGG GCCGGTATGG AAGACGCCGT ACTTGTAGGT
GAAGGGGTGA TAAGCCACGT TGTGGAAAAA GTGTTGGACG AGAGGCAGGA AGAGCTACGT
CTACTCGGAA GGAGGATTGA ACCTCTAGAA AAGGCAAAGC CGCCGTTTTA CAGAGTGTCC
TACGACGAGG CTGTGGACAT ACTCCAAAAG AAAGGCTTCG AGATTGGTTG GGGCGACGAT
ATAGGCGCAG ACGAGGAGAG GGCGCTCTCA CAAGACTTCG ATAAGCCGAT TGTCCTCTAC
GGATTCCCCG AGAAAGTCAA GGCGTTCTAC CACAGGAACA ATCCAAGGAG GCCAGAGGTC
ACACTAAGCT TCGATGTTTT GCTCCCAGAG GGCTACGGCG AGGTAATAGG CGGCGGCGAG
AGGATCTACC AGGCAGAGGA GCTTATAGAG AAAATCAAGA GATTCGGCCT CAACCCACAG
GATTACTGGT GGTATATTGA TCTCAGGCGC TACGGCTCAG TGCCCCACTC CGGCTTCGGC
CTCGGAGTTG ACAGGCTTAC CATGTGGATA GTCGGCGCAG ATCACATACG CGACGTCGTT
CCCTTCCCAC GAGATGTGAG GCGCACCGCG CCCTGA
 
Protein sequence
MEPYKVAIPI QEALRRGEGK VTLRGWVHRK RVLKEKIFIL LRDSTGVIQL VLPRDKFKDL 
EDLNLESALV VTGALVKEPR APGGVEMHVA SVDWVYRGEP YPINEDAVVA DSEYLLDVRH
LWIRSRKMQA VLKIRHTVFG AIHEYFRKNG FYEVHPPMFI TAAVEGGATL FKVQYFDKIV
YLTQSSQFYL EALIYGLEKV YTIAPSFRAE PSRTRRHLTE FWHAEMEIAW AGMEDAVLVG
EGVISHVVEK VLDERQEELR LLGRRIEPLE KAKPPFYRVS YDEAVDILQK KGFEIGWGDD
IGADEERALS QDFDKPIVLY GFPEKVKAFY HRNNPRRPEV TLSFDVLLPE GYGEVIGGGE
RIYQAEELIE KIKRFGLNPQ DYWWYIDLRR YGSVPHSGFG LGVDRLTMWI VGADHIRDVV
PFPRDVRRTA P