Gene Pars_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1330 
Symbol 
ID5054127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1199526 
End bp1200287 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID640468876 
ProductNAD-dependent deacetylase 
Protein accessionYP_001153545 
Protein GI145591543 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.211112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.636269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTGG AATCTGGAAA TCCTCTTGAA GAGGTAGCTT CGCTTATTGT CAGATCTTCG 
TGCAACGTGG CCCTCACCGG GGCGGGCGTC TCAACAGCCA GCGGGATACC CGACTTCAGG
GGGCCTCAGG GAGTGTGGAG GATGGTGGAC CCCGAGAAGT TCGAAATTAG CTACTTCCAC
GAGCACCCAG ACGAGGTGTG GGATCTCTTT GTAGAATTTT TCCTCCCGAC GTTCAACGCT
AAGCCAAATC CGGCGCACTA CGCATTGGCG GAGTTGGAAA AGTTGGGGAA GCTGTGCGCG
GTGATCACGC AGAATGTAGA CATGTTACAC CAAGCCGCAG GTAGTAGAAA CGTTGTTGAG
CTACACGGCT CTCTGAAAGA TGCGGTCTGC GTGGAGTGTG GGTCTAGGTA TCCTTTATCG
GAGGTGTTAA GACAGAGGAC AAGGGGGGCG CCTAAGTGCC CTAAGTGCGG TGGGGTGTTA
AAGCCAGACG TCGTGTTTTT CGGGGAGCCT CTGCCGCGGG ACGCGTTGAG AGAGGCGATG
ATGTTGGCTG AGATGGCCGA CGTCTTCATT GCCGCGGGGA CTTCCCTGGC TGTTTATCCC
GCCAACCAGC TGCCCCTCAT AGCGAAAAAG AGGGGGGCGA AGCTGGTTGT AATAAACGCC
GAGGAGACCT ATTACGACTT CGCTGCCGAC TATGTGTTCA GGGGTAAGGT GGAAGAGGTA
CTGCCGGCGC TTGTGGAGAA GGTTAAAGGC ATGTTATTTT AA
 
Protein sequence
MEVESGNPLE EVASLIVRSS CNVALTGAGV STASGIPDFR GPQGVWRMVD PEKFEISYFH 
EHPDEVWDLF VEFFLPTFNA KPNPAHYALA ELEKLGKLCA VITQNVDMLH QAAGSRNVVE
LHGSLKDAVC VECGSRYPLS EVLRQRTRGA PKCPKCGGVL KPDVVFFGEP LPRDALREAM
MLAEMADVFI AAGTSLAVYP ANQLPLIAKK RGAKLVVINA EETYYDFAAD YVFRGKVEEV
LPALVEKVKG MLF