Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1315 |
Symbol | |
ID | 5055924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1186556 |
End bp | 1187806 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640468861 |
Product | RNA modification protein |
Protein accession | YP_001153530 |
Protein GI | 145591528 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.107305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAGGG CCTATATAGA GACTTATGGT TGTTGGCTGG CTAAGGCCGA TGCGGAGATC ATCAGACAGA GACTGGGGCT TGTGGCTGTG GAAAGGCCCG AGGATGCCGA CGTGGTGATG ATCTATACAT GCGCGGTGAG GGAAGACGGC GAGGTTCGCC AGCTTGCAAG AATAAGGGAG CTTGCGGGTC TACGCAAGGA GGTTGTGGTG GCGGGTTGTC TCGCCAAGCT GAGGCCGTAT ACGATTAAAT CCGCAGCGCC TAACGCGCGT CTGTTATACC CCTCTGAGGT GGAGGGTGGG CAGAAGAGGG AGATGAAGGT ACTGCCCAGG TACGAGGGCG GCGTCATTTA CACGGTGCCT CTACAGGTCG GTTGCCTCGG CAACTGCACC TTCTGCGCTA CTAAGTACAC GCGGGGTGGC GCCGGCTACG TCAAGAGTGC CAATCCCGAC GACGTGGTGC GCCACGTGAA GGAGGCCGTG GCGAGGGGGG CGAAGGAGAT CTACCTGACA GGTCAAGACG TCATTACCTA CGGTTTCGAC ATGAGGTGGA GGCCCGGCTG GAGCCTGCCG GATCTCCTGG AGCGGATATT GAGGGAGGTG GAGGGGGAGT ACAGGGTTAG GATAGGCATG TCGGAGCCTT GGGTATTTGC GAGGTTTGCA GATCGTCTCC TCGACATTGT TAAGGGCGAC CGCCGGGTGT ACCGATACTT CCACCTCCCG GTGCAGTCCG GAAGCGATAG GGTGCTTAGA GCGATGGGGC GGAGATACAC CGTTGATGAG TATAGGGAGC TTGTGAGGAA GATTAGGAAG ACGTTGGGAG AGTTCGCCTT TGTCGCCACC GATATCATAG TCGGCTTCCC CGGCGAGGCT GAGGACGACT TCTGGGAGTC GGTGAAGCTG GTGGAGGAGC TCCAGCTGGA CAAGGTGCAC GTGGCTAGGT TTAGCCCGAG GCCCTTCACA GAGGCCGCTG TCATGCCTAG ACAAGTCCCC GACGCGGAGA AGAAGAGGAG GAGCAAAATC CTGAGTGAGG TCTCTCTTAG AGTGGCCCGT CTGAGAAACG GCCTGCGTGT GGGGAGCCGT GACGTCGTCT TAATCGACGA GGTTGACCAC GGGTTGGTTG TCGGCCGCGC AAGCGACTAC AGACAGGTGG TGGTGAAAAG GGGCCACGGC GACGGCCTCA TTGGCCAGTA CAGAGAAGTC CAGATAGTCG CCGCTGGCGC AGTCTACCTC TACGGCGACA TTGTAGAGTA G
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Protein sequence | MARAYIETYG CWLAKADAEI IRQRLGLVAV ERPEDADVVM IYTCAVREDG EVRQLARIRE LAGLRKEVVV AGCLAKLRPY TIKSAAPNAR LLYPSEVEGG QKREMKVLPR YEGGVIYTVP LQVGCLGNCT FCATKYTRGG AGYVKSANPD DVVRHVKEAV ARGAKEIYLT GQDVITYGFD MRWRPGWSLP DLLERILREV EGEYRVRIGM SEPWVFARFA DRLLDIVKGD RRVYRYFHLP VQSGSDRVLR AMGRRYTVDE YRELVRKIRK TLGEFAFVAT DIIVGFPGEA EDDFWESVKL VEELQLDKVH VARFSPRPFT EAAVMPRQVP DAEKKRRSKI LSEVSLRVAR LRNGLRVGSR DVVLIDEVDH GLVVGRASDY RQVVVKRGHG DGLIGQYREV QIVAAGAVYL YGDIVE
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