Gene Pars_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1299 
Symbol 
ID5055166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1173283 
End bp1174542 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content51% 
IMG OID640468845 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001153514 
Protein GI145591512 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATTT CCGTCCCAAA GCTTAATTCG GTAACGCTCC ACTATTTTGA AAACTGTGTT 
GGGTGCGCCG CCTGCGCCCC TTCCTGTCCG TACTACCACG TGGACAAACA CTACGCGCCT
GTAGAGAAGG CCGAGTTTTT AAGGGAAATT TTGCGGAAGA AATACACTCT TGCAGGCAAG
CTATTTGGGC CTTTAACGGG GGCTAAACTG CCGAAGAGAG AAGAGGAGTT TAGAAAACTT
ATAGAGTTTG CGTATCGCTG CGCCGACTGT GGTCATTGCT ATGTGACGTG CCCATTTGGA
ATTGACAGCG GTGCGATGGT TAATAAATTA CGGCAAGTGC TCTTCGGCGC AAGCTATGGC
CCTACCTTGT TGAGACAATT AAGCGCCTTG GAGAGGGACA AGGGGTACAT AGCCGCCGCC
AGGGCCATTT GGGAGGACTT CCTCAGAGAT GCGCATGCGC CGGTTGGGAA GAAGGGGGCT
CGGATATTAT TAATGGTCTC GCTGGGCGAT ATTATTTTAA CAAGACAAGC CGTTTTAGAC
GCAGTGTCGA TTCTCAAAAA GGTTGGCGAA GACTTCTCTC TTCCCGAAAA GCCTCTTGGC
ATATTCCCAC CTGTGGGCTA CACGGTGGGG GATGCAGAGT CTCTAAAAAC CGTAGTTGCA
GATATAGTGA GCTATATTGA AGGCCTTAGC CCCCAGGCTG TTGTCATGAT AAACGGGTGC
TATACATATC CCTATTTCAG ATTTGAGGCA ACTAACATCC TGAAGAGGAA GTTCAGTTTT
AAAGTACTAC ACATTTCGGA GTTGTTGGCT GAATATTTGA GACAGGGCAG GTTGAGGTTG
AAGAAGCGTA GTGTAAAGGC GGCGTTGCAA GATTCCTGCC AGCTCGCTAG GCGCGGTGGA
GTTATTGAGG AGCCGCGCGA GGTTTTAGAG ACTTGTGCCG AAGTCATAGA CGTTAAGCAC
AGCCGCGAGG ATGTAGAGTG TTTAGGCGGC GGGGCAGGCA TTGGGATATT GGCCAGACCG
GCGAGGGATG CGCTTGTGAA GACCCTCGGA GTTAGCGTTA CCCCCTCAGA CTGGGAGAGG
CAGTTTTTAG AAAAGCTGGA AAAAGACTAT GCAAAGGCCG CTAACAGGAG GGTAGAGGAG
TTGAGAAATG CCGGCGCCGA CGTAGTTGTC GCTCTTTGTC CATTTGCGCT AGAGGCATTA
AGAGGTGCGG GACTAGCCGC GGAGCACTTC GTCTCAGTTG TGGCAAAGGC GCTCGTGTAA
 
Protein sequence
MGISVPKLNS VTLHYFENCV GCAACAPSCP YYHVDKHYAP VEKAEFLREI LRKKYTLAGK 
LFGPLTGAKL PKREEEFRKL IEFAYRCADC GHCYVTCPFG IDSGAMVNKL RQVLFGASYG
PTLLRQLSAL ERDKGYIAAA RAIWEDFLRD AHAPVGKKGA RILLMVSLGD IILTRQAVLD
AVSILKKVGE DFSLPEKPLG IFPPVGYTVG DAESLKTVVA DIVSYIEGLS PQAVVMINGC
YTYPYFRFEA TNILKRKFSF KVLHISELLA EYLRQGRLRL KKRSVKAALQ DSCQLARRGG
VIEEPREVLE TCAEVIDVKH SREDVECLGG GAGIGILARP ARDALVKTLG VSVTPSDWER
QFLEKLEKDY AKAANRRVEE LRNAGADVVV ALCPFALEAL RGAGLAAEHF VSVVAKALV