Gene Pars_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1281 
Symbol 
ID5054663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1159312 
End bp1160052 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID640468828 
Producthypothetical protein 
Protein accessionYP_001153497 
Protein GI145591495 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.400833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCA GGCGCCCGCT GGTGAAGGCG TTCGCAGAGA AGGCCGTCCC GCTGGCGGAA 
GGTCTGAGGA TCGTTGACTA CTGCCTATGT CTCAAGGGCG GATACGTCGT GGTCGAGGGG
CCTAAGGGGA AGGCCTTGGG GTTCGCCCAC ATACCCCACG AGGATCTCCA CGATTTGGGC
GAAGTGAGGC GGCCCCGGCT GGAGGAGATG CCGGAGTTCG TGACGGACCT AAACCCGCTC
AACAGAGTGC TAGGAGTGGC CATGATGAAC GCCGTTTCGC AGTACCACCT AGACGCAACG
CCTGGCTTAG TCGACCCTTA CCTCGAGGAG GAGCCCATAT GCCTCGTGGG CAACATGGGG
CCGTTGGCGG AGAAGCTCAG AAGAGAGGGG AAAGAGGTTT GGGTGTTCGA GAGGTCAAGG
GAGCTCAGAT GGCGCGCCTA CTCCGACGTT GAGGAAGAGC TCCTGCTCCC GCGGTGTAGG
ACCTTGGTGA TCACTGGGAT GACCCTCCTC AACTTCACCT TGGATAGAGT GCTGGAGCTC
TCCCAGGGTC TCAACATACT GACGGGGCCC ACGGCCGGCG TACACCCAGC ACTGGTCAAG
GGCTCGAGGG TTCACGTGCT CGCCTCTATG AAGTTCAAGA TAGAGGTTGC CGTCAACCAC
CTCAAGCGAG GTGGATACAT CTCGCTGGCC ATACACTCGG ACCTCGGCGT GCCTTATGTT
GTGGATTTAA GGAATACTTA A
 
Protein sequence
MASRRPLVKA FAEKAVPLAE GLRIVDYCLC LKGGYVVVEG PKGKALGFAH IPHEDLHDLG 
EVRRPRLEEM PEFVTDLNPL NRVLGVAMMN AVSQYHLDAT PGLVDPYLEE EPICLVGNMG
PLAEKLRREG KEVWVFERSR ELRWRAYSDV EEELLLPRCR TLVITGMTLL NFTLDRVLEL
SQGLNILTGP TAGVHPALVK GSRVHVLASM KFKIEVAVNH LKRGGYISLA IHSDLGVPYV
VDLRNT