Gene Pars_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1142 
Symbol 
ID5054739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1035037 
End bp1035933 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content52% 
IMG OID640468696 
Productmanganese containing catalase 
Protein accessionYP_001153370 
Protein GI145591368 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3546] Mn-containing catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0584316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTAA GAATAGACAG GCTGCAAATC GAACTCCCAG CCCCGAAGGA GCCTGACCCA 
AACGCCGCCG CCGCTGTACA AGAGCTTCTA GGCGGCAGAT TTGGCGAAAT GTCCACATTA
ATGACCTATA CTTACCAGTC ATTTAACTAC CGCCTGCACC GCAATCCCGC CATCAAGCCC
TTTAGAGACC TCGTATCTAA CATAGCCACG GAGGAGCTAG GCCACATCGA GCTTGTAAGC
GCCGTGGTCA ATGCCCTCTA CGTAGGATCC ACGAAGTACG CACCTCCAGA ACAGGCGCCG
CTCAAGCCGC TAAAAGACGT TAGAAACACC TACCACGTAA TTAACACGGG GCTAACCGCC
TTCCCCATGG ACTCGCACGG AAACCCATGG AGAGGAGACT ATATCTTTAT AAGCGGCGTC
CTTGAAATTG ACTTGTTATT CAACTTCTTC TTAGAAGTGG GAGCCAGACT GGCAAAGATG
AGAGTTTATG AAATGACAGA CAACCCGGTG GCCAGGGAAA TGATAGGCTA CCTCTTGGTA
AGAGGAGGCG TACACGCCAT GGCCTACGGC AAGGCGCTTG AGGCTCTGAC CGGCGTAGAA
GTCTGGCGCA TGCTCCCACT CCCAAGAATA GACAACTCCA AATTCCCAGA GGCGGCTAAG
TACGAGAAAA TGGGCATACA CCGTACGCTG TACAGATTCA GCCCCTCGGA CTACAAAGAC
ATCGAGCTGA TATGGAGAGG GACCCATCCA CAAGACGGCC AGCCACTAGT AGTCCACGAC
GGGCCGCCGC CCGGCGGCGA GTACAATGAA TTGCCGGAAG TGCCCGAAGA ATTTGCACCA
GGACTCTACA AAGACGACTT TGTTAGAATT GCAAAAAGGC TAGGAATAAA TCTCTAA
 
Protein sequence
MYLRIDRLQI ELPAPKEPDP NAAAAVQELL GGRFGEMSTL MTYTYQSFNY RLHRNPAIKP 
FRDLVSNIAT EELGHIELVS AVVNALYVGS TKYAPPEQAP LKPLKDVRNT YHVINTGLTA
FPMDSHGNPW RGDYIFISGV LEIDLLFNFF LEVGARLAKM RVYEMTDNPV AREMIGYLLV
RGGVHAMAYG KALEALTGVE VWRMLPLPRI DNSKFPEAAK YEKMGIHRTL YRFSPSDYKD
IELIWRGTHP QDGQPLVVHD GPPPGGEYNE LPEVPEEFAP GLYKDDFVRI AKRLGINL