| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1027 |
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| Symbol | |
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| ID | 5054861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 915428 |
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| End bp | 915820 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640468583 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001153257 |
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| Protein GI | 145591255 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.19731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.490071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGGATG AGGTTTTGTA TTGGCTGTCT GAGGCGAGGG CTGACTTACG CCACGCGGAG
GCCAGCATGA GGCTTGGCGA CTACAACTGG GCGTGCTTCG CTGCGCAACA GGCGGCGGAG
AAGGCGCTTA AGGCCCTTAT CCTACACCTA TTGGGGGAGT ATCCCAGAGG CCACGACTTG
GTGGTGCTTT ACAGGCGGGT TAGGGCACAT CTTCAGCTCG GCGTGGGTGA GGCGGCTTTG
TCCAGGCTTT CAGCTTTTTA TACCTTGGCG AGGTATCCAA ATGCGGGGCT TGTGAGGCCT
TCTGAGGAGA TCACGAGTGA GCAGGCCGAG GAGGCGCTGG CTACGGCGCG GGTGGTAGTG
GATGAGGTCG CAAAGGCTTT GGGAGATCCG TGA
|
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| Protein sequence | MRDEVLYWLS EARADLRHAE ASMRLGDYNW ACFAAQQAAE KALKALILHL LGEYPRGHDL
VVLYRRVRAH LQLGVGEAAL SRLSAFYTLA RYPNAGLVRP SEEITSEQAE EALATARVVV
DEVAKALGDP
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